LOCUS       QLY32560.1               762 aa    PRT              BCT 27-JUL-2020
DEFINITION  Nocardia huaxiensis copper-translocating P-type ATPase protein.
ACCESSION   CP059399-1995
PROTEIN_ID  QLY32560.1
SOURCE      Nocardia huaxiensis
  ORGANISM  Nocardia huaxiensis
            Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae;
            Nocardia.
REFERENCE   1  (bases 1 to 8339910)
  AUTHORS   Zhuang,K. and Ran,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2020) Dermatovenereology, West China Hospital,
            Sichuan University, Guoxue Xiang, Wuhou District, Chengdu, Sichuan
            610041, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: FALCON v. AUGUST-2019
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 250.0x
            Sequencing Technology  :: PacBio Sequel
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 07/22/2020 23:23:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.12
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 7,641
            CDSs (total)                      :: 7,551
            Genes (coding)                    :: 7,450
            CDSs (with protein)               :: 7,450
            Genes (RNA)                       :: 90
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 101
            CDSs (without protein)            :: 101
            Pseudo Genes (ambiguous residues) :: 0 of 101
            Pseudo Genes (frameshifted)       :: 23 of 101
            Pseudo Genes (incomplete)         :: 76 of 101
            Pseudo Genes (internal stop)      :: 7 of 101
            Pseudo Genes (multiple problems)  :: 5 of 101
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Nocardia huaxiensis"
                     /mol_type="genomic DNA"
                     /strain="WCH-YHL-001"
                     /isolation_source="skin sample from patient"
                     /host="Homo sapiens"
                     /type_material="type strain of Nocardia huaxiensis"
                     /db_xref="taxon:2755382"
                     /country="China: Chengdu"
                     /collection_date="2013"
                     /collected_by="Kaiwen Zhuang"
     protein         /locus_tag="H0264_10115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019970837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MSAPAPERDQ LGGGSLPDSS LPVQSIELEI GGMTCASCAS RIEKKLNRMD GVTATVNYAT
       61 EKAKVSFPES VSADDLIAKV VDTGYTASVH DPNPVKKTES EGDSAPSATQ QLRHRLLVSL
      121 ALAIPVVAVA MVPALQFENW QWFSLTLTAP IVVWAGWQFH RAAWVNAKHG AATMDTLISL
      181 GTLAAFGWSV YALFFGDAGM PGMKHPFSLA ITRGDSSSAL YFEVAATLIT AILAGRYFET
      241 RSKEKAGSAL RALLELGAKD VAVLRNGVET RIPIGELHVG DEFLVRPGEK IATDGVVVSG
      301 NSALDMSMLT GESVPVEVGP GDQVVGATVN AGGLLTVRAT RVGADTQLAQ MASLVEEAQN
      361 GKAQVQRLAD RVAGVFVPIV IAIAVAALGF WLGTGVAVAT AFGAAVAVLI IACPCALGLA
      421 TPTALLVGTG RGAQLGILIK GPQVLESTRR IDTVVLDKTG TVTTGKMTLA EVIPAEGVNS
      481 DELLSVAAAV EHGSEHPVAR AVVSGAADRG LDTEQVEQFV SHGGKGVQGL VGERAVVIGR
      541 TELLADWSVT LPESLAQAKS RAESAGHTAI AVAWDGVARG VLVIADAIKD TSAEAIADLK
      601 ALGLTPVLLT GDNAAAARTV ADQVGIDEVI AEVLPADKLD VVKKLQEQGK VVAMVGDGVN
      661 DAAALAQADL GLAMGTGTDV AIEAGDITLV RGDLRTVGTA IRLSRATLRT IKSNLFWAFG
      721 YNVAAIPLAA AGLLNPMLAG AAMALSSVFV VSNSLRLRRF KG
//