LOCUS QLY32049.1 395 aa PRT BCT 27-JUL-2020 DEFINITION Nocardia huaxiensis YncE family protein protein. ACCESSION CP059399-1399 PROTEIN_ID QLY32049.1 SOURCE Nocardia huaxiensis ORGANISM Nocardia huaxiensis Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia. REFERENCE 1 (bases 1 to 8339910) AUTHORS Zhuang,K. and Ran,Y. TITLE Direct Submission JOURNAL Submitted (21-JUL-2020) Dermatovenereology, West China Hospital, Sichuan University, Guoxue Xiang, Wuhou District, Chengdu, Sichuan 610041, China COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: FALCON v. AUGUST-2019 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 250.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 07/22/2020 23:23:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.12 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 7,641 CDSs (total) :: 7,551 Genes (coding) :: 7,450 CDSs (with protein) :: 7,450 Genes (RNA) :: 90 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 3 Pseudo Genes (total) :: 101 CDSs (without protein) :: 101 Pseudo Genes (ambiguous residues) :: 0 of 101 Pseudo Genes (frameshifted) :: 23 of 101 Pseudo Genes (incomplete) :: 76 of 101 Pseudo Genes (internal stop) :: 7 of 101 Pseudo Genes (multiple problems) :: 5 of 101 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Nocardia huaxiensis" /mol_type="genomic DNA" /strain="WCH-YHL-001" /isolation_source="skin sample from patient" /host="Homo sapiens" /type_material="type strain of Nocardia huaxiensis" /db_xref="taxon:2755382" /country="China: Chengdu" /collection_date="2013" /collected_by="Kaiwen Zhuang" protein /locus_tag="H0264_07085" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_010314188.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MTARRARLGV IACFLVLAGC SGSKAGTVDS TAAAPSTTVA PTTAEAAANL LPGMPPPLSP 61 TDVYAATREL SPAVAGHLTR VYVPNSESNS VTVIDPATFQ VIDTYPSGGK EPQHVVPSYD 121 LQTLYVNNDL PIGGGSLLPI DPRTGAAGQP IPVRDPYNLY FTPDGRYALV IAEADKSIDI 181 YDPHSWQKID AIAVPDCPGV NHMDFTADGR FALTSCEFSG RMAVVDIAAL SLVKMIDLPQ 241 GRGGKPQDVK LSPDGRTFYV ADMVADGIYV FDAKTFDNTG FLPTGHGAHG LYVTRDSRQM 301 LITNRHEGSL SVWDFAANAL VHKWFIPGGG SPDMGNLSVD GRVFWVAGRY HGEVYAIDIA 361 EWKLLARIKV GNGAHGLTIW PQPGRYSTGH TGVMR //