LOCUS QLY31211.1 553 aa PRT BCT 27-JUL-2020 DEFINITION Nocardia huaxiensis DUF2142 domain-containing protein protein. ACCESSION CP059399-426 PROTEIN_ID QLY31211.1 SOURCE Nocardia huaxiensis ORGANISM Nocardia huaxiensis Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia. REFERENCE 1 (bases 1 to 8339910) AUTHORS Zhuang,K. and Ran,Y. TITLE Direct Submission JOURNAL Submitted (21-JUL-2020) Dermatovenereology, West China Hospital, Sichuan University, Guoxue Xiang, Wuhou District, Chengdu, Sichuan 610041, China COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: FALCON v. AUGUST-2019 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 250.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 07/22/2020 23:23:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.12 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 7,641 CDSs (total) :: 7,551 Genes (coding) :: 7,450 CDSs (with protein) :: 7,450 Genes (RNA) :: 90 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 3 Pseudo Genes (total) :: 101 CDSs (without protein) :: 101 Pseudo Genes (ambiguous residues) :: 0 of 101 Pseudo Genes (frameshifted) :: 23 of 101 Pseudo Genes (incomplete) :: 76 of 101 Pseudo Genes (internal stop) :: 7 of 101 Pseudo Genes (multiple problems) :: 5 of 101 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Nocardia huaxiensis" /mol_type="genomic DNA" /strain="WCH-YHL-001" /isolation_source="skin sample from patient" /host="Homo sapiens" /type_material="type strain of Nocardia huaxiensis" /db_xref="taxon:2755382" /country="China: Chengdu" /collection_date="2013" /collected_by="Kaiwen Zhuang" protein /locus_tag="H0264_02150" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_019931883.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MTVRSERPAE SDIVVTEASE NDSTETQPDA AATANGSVET TVAQPKKIAA AQPDTKAEPG 61 GLRGAVIRLE RRFGSAALVF VLLAGVFGAI FSVVTPPFWG HDEITQFGRA YQVAHGGFTP 121 EKIPDDRGPA WGGYLPASID ALMTHAFEDY NNNTDEPDPM VADRGAYDRL GAAAVGGPEK 181 KVWFTNTAAY SPVPYLPQAA GIRIAEALDL SVGGTVLATR WAGLLAYLAI VGFAVRMLRG 241 HRIQWLALTV AVLPIAVFQA GTVTADTVTN ALALLVSAVI VKALFLGDRL SKPETVAALA 301 ATILLPVCKP TYVLLAMLTV LIPARRFGFG NAERPAAWQR ALPWLCAVIG GVSFALWMRI 361 AAPTGDGMSL MRPQKQWGTV KPGEQLKEIL SDPIQFLSTF GDSIARRDQR WFTQFFGELG 421 FAYVDVPAIT ILASLLAFAV SLGIADRLTG ARGATNVRTA LVALTIAASV AMIYVTLYMS 481 FTPVGYYIID GVQGRYFVPL ALLALTVILR WMPLRLTDAR GRTPSRGPAL TVIAATSIAL 541 LAAVIKYATI VWG //