LOCUS QLY31003.1 626 aa PRT BCT 27-JUL-2020 DEFINITION Nocardia huaxiensis ABC transporter ATP-binding protein protein. ACCESSION CP059399-187 PROTEIN_ID QLY31003.1 SOURCE Nocardia huaxiensis ORGANISM Nocardia huaxiensis Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia. REFERENCE 1 (bases 1 to 8339910) AUTHORS Zhuang,K. and Ran,Y. TITLE Direct Submission JOURNAL Submitted (21-JUL-2020) Dermatovenereology, West China Hospital, Sichuan University, Guoxue Xiang, Wuhou District, Chengdu, Sichuan 610041, China COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: FALCON v. AUGUST-2019 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 250.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 07/22/2020 23:23:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.12 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 7,641 CDSs (total) :: 7,551 Genes (coding) :: 7,450 CDSs (with protein) :: 7,450 Genes (RNA) :: 90 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 3 Pseudo Genes (total) :: 101 CDSs (without protein) :: 101 Pseudo Genes (ambiguous residues) :: 0 of 101 Pseudo Genes (frameshifted) :: 23 of 101 Pseudo Genes (incomplete) :: 76 of 101 Pseudo Genes (internal stop) :: 7 of 101 Pseudo Genes (multiple problems) :: 5 of 101 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Nocardia huaxiensis" /mol_type="genomic DNA" /strain="WCH-YHL-001" /isolation_source="skin sample from patient" /host="Homo sapiens" /type_material="type strain of Nocardia huaxiensis" /db_xref="taxon:2755382" /country="China: Chengdu" /collection_date="2013" /collected_by="Kaiwen Zhuang" protein /locus_tag="H0264_00940" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_014353695.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MSMESVAWNQ LYRQMNAPTE QRPLRLATAK RILAFARRHH RRLAWFLVLS IGSALLAVAT 61 PVLAGRVVDT IVGGGPARTV VVLAAIIAVV AVLDAGLGLV IRWLSARIGE GLIFDLRTAV 121 FDHVQRMPVA FFTRTRTGAL VSRLNNDVIG AQRAFSSTLS GVVTNVVTLA LTLVVMLRLS 181 WQITLLALVL LPVFVLPARR MGERLAGIQR EASGLNAAMS TQMTERFSAP GATLVKLFGR 241 PQQESAEFAT RAGRVRDIGV RTAMLQTVFV TALTLVSALA LALVYGLGGY MALRGQLDPG 301 AVVALSLLLT RLYSPLTALA SARVDVMSAM VSFERVFEIL DLKPLIEDAP EAKPVPEGPV 361 AVELDHVRFG YPSADKVSLA SLEDVATLDT RGGEEVLHGV SLRAEPGQLV ALVGSSGAGK 421 STIAQLVSRL YDVDSGSVRL GGTDVRELTG RSIQDTVGLV TQDGHLFHDT IRANLLLARP 481 EATEDELWDA LRRARLFELI SALPDGLDTV VGERGYRLSG GERQRLTIAR LLLKQPRVVI 541 LDEATASLDS TSEAAVQEAL AEALDGRTAL VIAHRLSTIR NADQIVVLEH GTVVERGTHT 601 QLLAAGGRYA ELYRTQFADD STPAAA //