LOCUS QLY29551.1 857 aa PRT BCT 27-JUL-2020 DEFINITION Nocardia huaxiensis SDR family NAD(P)-dependent oxidoreductase protein. ACCESSION CP059399-6036 PROTEIN_ID QLY29551.1 SOURCE Nocardia huaxiensis ORGANISM Nocardia huaxiensis Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia. REFERENCE 1 (bases 1 to 8339910) AUTHORS Zhuang,K. and Ran,Y. TITLE Direct Submission JOURNAL Submitted (21-JUL-2020) Dermatovenereology, West China Hospital, Sichuan University, Guoxue Xiang, Wuhou District, Chengdu, Sichuan 610041, China COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: FALCON v. AUGUST-2019 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 250.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 07/22/2020 23:23:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.12 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 7,641 CDSs (total) :: 7,551 Genes (coding) :: 7,450 CDSs (with protein) :: 7,450 Genes (RNA) :: 90 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 3 Pseudo Genes (total) :: 101 CDSs (without protein) :: 101 Pseudo Genes (ambiguous residues) :: 0 of 101 Pseudo Genes (frameshifted) :: 23 of 101 Pseudo Genes (incomplete) :: 76 of 101 Pseudo Genes (internal stop) :: 7 of 101 Pseudo Genes (multiple problems) :: 5 of 101 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Nocardia huaxiensis" /mol_type="genomic DNA" /strain="WCH-YHL-001" /isolation_source="skin sample from patient" /host="Homo sapiens" /type_material="type strain of Nocardia huaxiensis" /db_xref="taxon:2755382" /country="China: Chengdu" /collection_date="2013" /collected_by="Kaiwen Zhuang" protein /locus_tag="H0264_30540" /inference="COORDINATES: protein motif:HMM:NF012334.1,HMM:NF012711.1,HMM:NF024591.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MELPRSVRIA LGATSYGISD RRLAPAVGGK VILVTGASSG VGRATALRLA RNGATVLAVA 61 RRENLLKELR DEAAGAPGSI HPYPTDLTDI DACARLVERA LADHGHIDVF VSNAGRSIRR 121 WLSDSLDRWD NFDETTMVNY LGPVRLVMSL MPSMRARGRG HIVNVSTAGV HAPPVGWTNY 181 IATKAAFNTW MRGAAPELRA DGITCSSVHL QLVRTDMLGP WRIYRYTPGN SPEEAASVVC 241 RAIVDRPYAI RPWFERAGAP VMYALDNSRA AQRALAMYAR VGNWNNRPTD WARSIDIVER 301 SANLLDDLVG LAGRAPSLDI RNVVSPGRIP QLLFSLRGGV GLATVLSTFA ARFPDRAAII 361 DDHGTITAAE LETRVLRLAA ALRARWRIGR GDRVAVLCRN HRGFAEGIYA AARLSADLIP 421 LNYGFAGPQI GEVLRRENVS LLLYDAEFHG EIAKSGYDGR RVIVRGAAGG LPTVDELVAA 481 GGPPVRTPAY GSSIVILTGG TTGVPKGAPR GLGMREVLPM LGTLHPRMLL ALEDAARFEP 541 LPRLGAPVVL APPLHHAYGF FALAACFAMA STALIHEKFD PEQVLADIER HSVHLAMLVP 601 TMVKRIMDLP PEVRRNYNTD SLQAVPCGAA PLPPWLAVAF MDEFGDVLFN GYASTETGVG 661 ALATPADLRA APGTVGRPPT GLVDIRIVDD AGRELPVGRT GRIVNKNPLL FRGYSDGRQK 721 AMVGKYMDSG DLGHFDSAGR LFIDGRSDDM ILSGGENVFP QEVEETLMAH PAVADAGAVG 781 VPDEDFGQRL AAAVVLKPGH RVTAAALEAY VKATLANYKV PREVVFVAEL PRTTAGKLRR 841 QQLPEVIGIA QNTETTA //