LOCUS QLY29135.1 415 aa PRT BCT 27-JUL-2020 DEFINITION Nocardia huaxiensis protein translocase subunit SecF protein. ACCESSION CP059399-5555 PROTEIN_ID QLY29135.1 SOURCE Nocardia huaxiensis ORGANISM Nocardia huaxiensis Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia. REFERENCE 1 (bases 1 to 8339910) AUTHORS Zhuang,K. and Ran,Y. TITLE Direct Submission JOURNAL Submitted (21-JUL-2020) Dermatovenereology, West China Hospital, Sichuan University, Guoxue Xiang, Wuhou District, Chengdu, Sichuan 610041, China COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: FALCON v. AUGUST-2019 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 250.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 07/22/2020 23:23:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.12 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 7,641 CDSs (total) :: 7,551 Genes (coding) :: 7,450 CDSs (with protein) :: 7,450 Genes (RNA) :: 90 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 3 Pseudo Genes (total) :: 101 CDSs (without protein) :: 101 Pseudo Genes (ambiguous residues) :: 0 of 101 Pseudo Genes (frameshifted) :: 23 of 101 Pseudo Genes (incomplete) :: 76 of 101 Pseudo Genes (internal stop) :: 7 of 101 Pseudo Genes (multiple problems) :: 5 of 101 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Nocardia huaxiensis" /mol_type="genomic DNA" /strain="WCH-YHL-001" /isolation_source="skin sample from patient" /host="Homo sapiens" /type_material="type strain of Nocardia huaxiensis" /db_xref="taxon:2755382" /country="China: Chengdu" /collection_date="2013" /collected_by="Kaiwen Zhuang" protein /gene="secF" /locus_tag="H0264_28095" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_019047905.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MSNPIVDSDI DYVEAAPDAP KHSFLERLYT GTGGFEIVGR RKLYYGLAAA FVIISLLSIA 61 IRGFTLGIDF AGGSRIQIPA SDNISVSQVE QVYTDTLGHA PVTVQKVGSG SSATIQVRSD 121 TLDAEQSDRL QLALFEAFHP KDSDGVVDRN AISIAEISET WGHQITQKAL IALVVFIALT 181 MVYIAIRFER DMSFAAIASL FFNLIVTAGI YSLVGFEVTP AAVIGLLTIL GYVLYDNVVV 241 FDKVEENTKG ILHVTRRTYA EQANLAANQT LMRSISTTVI GILPIIGMLV IAVWLLGVGT 301 LKDLALVQLV GMIVGAYSSI FFAVPLLVSI KERFGPVAAH TRKVLAKRSG ATSSRVATAA 361 SARAGRTAVR DADYETHGAA NGFSGGRESS GPRTRDAGAP RPGAKPSGKR HKRRH //