LOCUS       QLY28483.1               450 aa    PRT              BCT 27-JUL-2020
DEFINITION  Nocardia huaxiensis HupE/UreJ family protein protein.
ACCESSION   CP059399-4805
PROTEIN_ID  QLY28483.1
SOURCE      Nocardia huaxiensis
  ORGANISM  Nocardia huaxiensis
            Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae;
            Nocardia.
REFERENCE   1  (bases 1 to 8339910)
  AUTHORS   Zhuang,K. and Ran,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2020) Dermatovenereology, West China Hospital,
            Sichuan University, Guoxue Xiang, Wuhou District, Chengdu, Sichuan
            610041, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: FALCON v. AUGUST-2019
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 250.0x
            Sequencing Technology  :: PacBio Sequel
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 07/22/2020 23:23:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.12
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 7,641
            CDSs (total)                      :: 7,551
            Genes (coding)                    :: 7,450
            CDSs (with protein)               :: 7,450
            Genes (RNA)                       :: 90
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 101
            CDSs (without protein)            :: 101
            Pseudo Genes (ambiguous residues) :: 0 of 101
            Pseudo Genes (frameshifted)       :: 23 of 101
            Pseudo Genes (incomplete)         :: 76 of 101
            Pseudo Genes (internal stop)      :: 7 of 101
            Pseudo Genes (multiple problems)  :: 5 of 101
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Nocardia huaxiensis"
                     /mol_type="genomic DNA"
                     /strain="WCH-YHL-001"
                     /isolation_source="skin sample from patient"
                     /host="Homo sapiens"
                     /type_material="type strain of Nocardia huaxiensis"
                     /db_xref="taxon:2755382"
                     /country="China: Chengdu"
                     /collection_date="2013"
                     /collected_by="Kaiwen Zhuang"
     protein         /locus_tag="H0264_24330"
                     /inference="COORDINATES: protein motif:HMM:NF025167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MTRTLWRVLG VVGCAVVVLL LNPIAVSAHP VPGTRVLLDV RETAVEAELS IPTGELAAAS
       61 GIDVDLRASL SGGDAAGLGR YLREHVRAAS SDGRAWGVEI GDMRVEYAEG TALGAYKQLV
      121 VRAVLTPPAE VDMRRFVLGY DAVIHKVGTH IAIVSVRQDW QGGRVDAGND ARQVGVVRMD
      181 AETGTVPPLS VDLTDGGAWR GFVGMVVLGG HHILEGTDHL LFLFTLLLPA VLIARAGRWQ
      241 PDNRAGRAMR HIVAVTVAFT VGHSAALVVS ALGRLEIPVQ PVETLIAATI LVGGVHAVRP
      301 LFPGREAGVA GVFGLVHGMA FSFTLAELKL SSSQLALSVL GFNLGIEAVQ LFLVALTLPS
      361 LLVLAATRAQ PFLRVGGAVL AVVAALGWVF DRLGVANPVA RAADQGGALI LPIVTTAAAV
      421 AVLVLTVQTF RRRIDRGNPA SKPLWEKVIP
//