LOCUS       QLY28224.1               838 aa    PRT              BCT 27-JUL-2020
DEFINITION  Nocardia huaxiensis nitrate- and nitrite sensing domain-
            containing protein protein.
ACCESSION   CP059399-4509
PROTEIN_ID  QLY28224.1
SOURCE      Nocardia huaxiensis
  ORGANISM  Nocardia huaxiensis
            Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae;
            Nocardia.
REFERENCE   1  (bases 1 to 8339910)
  AUTHORS   Zhuang,K. and Ran,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2020) Dermatovenereology, West China Hospital,
            Sichuan University, Guoxue Xiang, Wuhou District, Chengdu, Sichuan
            610041, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: FALCON v. AUGUST-2019
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 250.0x
            Sequencing Technology  :: PacBio Sequel
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 07/22/2020 23:23:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.12
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 7,641
            CDSs (total)                      :: 7,551
            Genes (coding)                    :: 7,450
            CDSs (with protein)               :: 7,450
            Genes (RNA)                       :: 90
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 101
            CDSs (without protein)            :: 101
            Pseudo Genes (ambiguous residues) :: 0 of 101
            Pseudo Genes (frameshifted)       :: 23 of 101
            Pseudo Genes (incomplete)         :: 76 of 101
            Pseudo Genes (internal stop)      :: 7 of 101
            Pseudo Genes (multiple problems)  :: 5 of 101
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Nocardia huaxiensis"
                     /mol_type="genomic DNA"
                     /strain="WCH-YHL-001"
                     /isolation_source="skin sample from patient"
                     /host="Homo sapiens"
                     /type_material="type strain of Nocardia huaxiensis"
                     /db_xref="taxon:2755382"
                     /country="China: Chengdu"
                     /collection_date="2013"
                     /collected_by="Kaiwen Zhuang"
     protein         /locus_tag="H0264_22840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019926249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MFTARLGVRT RVLAIALVPS LALLVIGVGG AGYLVVEGRN ARDWAVALRD FTPLTKELVG
       61 SVQQERQLTL AQLGGEAPNP KGVAQARLRL DAALRAFAPT TATMEDLGPE GVKGDVGGFN
      121 TLIAQLAAVR TQVDAHALTL SDTYTFYSHL LDVISIGTQA VQTTAPSAEV AVETGETLTI
      181 VGASEMLSRS TSLASILAND GTLPPELAAE FSRLVGGYRV SIEGMATTDE QERVAAAQAI
      241 TAMPSWGRLA FMENSFIARA LDPITAVKPK TEPDPLPFTV EEWQAAANEV NTALLELWDS
      301 QSQHAQGLAV DAAETDARNS ALAGSALFAV AVLAFLVALV LANRIIRRLK RLRDQTFALA
      361 DERLPEIMRK LREGEQVDPQ TETPPLDFGG DEIGQVAQAF SHAHAAAVAA AITESRTREG
      421 VKSVFLNIAH RSQVVVHRQL EVLDEAESKQ EDPALLELFF RLDHLATRER RNAENLIILA
      481 GGQPGRQWRN PVQLVEVVRS GVGEALDYTR VKIARLPEVS VAGTAVADLV HLIAELVDNA
      541 AHFSPPQSQV SVRGNVVGKG VAVEIIDQGM GIPEPEIARI NDMLRNPPDF GVTTLSEDSR
      601 LGMFVVAQLA VRNGISVRLT ESDYGGVRAI VLVPSGLTVP AGRTGEIPAV PRQLDATTTG
      661 THALAATGAH ALPAAGNSIA LPAARHSAPD EPAPAAPAPP AAHPDHRFPQ QMSFDTPAPF
      721 DPPTNPNSWR DRPQPQIPRE NGFRSSEFGG SHYTGSDGRP ALPRRRRQAS LAPELAQEKA
      781 TQEAPPEPTR TAEQARDLMS AIANGTRQGR QADPSANAPT SNGIQDRQEG DGDHLKRW
//