LOCUS QLY27743.1 717 aa PRT BCT 27-JUL-2020 DEFINITION Nocardia huaxiensis protein kinase protein. ACCESSION CP059399-3949 PROTEIN_ID QLY27743.1 SOURCE Nocardia huaxiensis ORGANISM Nocardia huaxiensis Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia. REFERENCE 1 (bases 1 to 8339910) AUTHORS Zhuang,K. and Ran,Y. TITLE Direct Submission JOURNAL Submitted (21-JUL-2020) Dermatovenereology, West China Hospital, Sichuan University, Guoxue Xiang, Wuhou District, Chengdu, Sichuan 610041, China COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: FALCON v. AUGUST-2019 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 250.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 07/22/2020 23:23:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.12 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 7,641 CDSs (total) :: 7,551 Genes (coding) :: 7,450 CDSs (with protein) :: 7,450 Genes (RNA) :: 90 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 3 Pseudo Genes (total) :: 101 CDSs (without protein) :: 101 Pseudo Genes (ambiguous residues) :: 0 of 101 Pseudo Genes (frameshifted) :: 23 of 101 Pseudo Genes (incomplete) :: 76 of 101 Pseudo Genes (internal stop) :: 7 of 101 Pseudo Genes (multiple problems) :: 5 of 101 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Nocardia huaxiensis" /mol_type="genomic DNA" /strain="WCH-YHL-001" /isolation_source="skin sample from patient" /host="Homo sapiens" /type_material="type strain of Nocardia huaxiensis" /db_xref="taxon:2755382" /country="China: Chengdu" /collection_date="2013" /collected_by="Kaiwen Zhuang" protein /locus_tag="H0264_20005" /inference="COORDINATES: protein motif:HMM:NF012298.1,HMM:NF012618.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MGSVYLARHP RLPMNVALKI LLPELGRDDE ARAYFHREAD IVARLQHPHI VRVHDRGAEG 61 DHLWIAMDYV NGPDIAQLLR SGPLPPQRTL EIIGQAAQGL DHAHRQGVLH RDVKPANLLT 121 TMGAGRNHVY LTDFGIARTA DDPTTVTASV RATFAYAAPE LLTGGVLDHR ADIYALGATL 181 YRLLTNTVPY PRDTLAAILH AHLTQPPPQP TAVRSDLPPR IDQVIAIAMA KDPADRYPTC 241 LALAHAAHSA LQQFGPGSGQ QWAPPTRPIE PGPQPDTQSS RDARPPSHPS WPQQRVPPIP 301 QPNPAPTQLN PAVHQPRVAP TQMNPAVHQQ YPARPHTNPS QPQPRLPQPY SSRPQPYPIL 361 SDPNTQPPPA DTSAPPKPRM LSRRRFLIGA AIAVPVAAAA GSIPLLAGRD GSSGPQGARL 421 RAVLSGHTGL VHAVAFSPDG KTLATASFDN TARLWNVEAQ AQQGEPLTGH SDRVRSVAFS 481 PDGTLLATTS ADTTARIWEV STGYQSGDTL TEGSVSINGI AFSPDGTLLA IAASDSTVHF 541 RSAKTRTASG NSLTGHNGAV AAVAFSPDGT TVATASFDTT LRLWDLRTRQ SISDPLTGHT 601 DRVRTIAFNS DGTLLATNSA DATARLWDVR TRKQLGEPIT GHTAGIRSVA FSPDGRTLVT 661 TSDDRTARLW DIESRAQIGE PLTGHTDAVY AAAFSPDGSL LATTSSDKTI RLWTVSR //