LOCUS QJW38729.1 869 aa PRT BCT 29-DEC-2022
DEFINITION Cellulosimicrobium protaetiae family 43 glycosylhydrolase protein.
ACCESSION CP052758-72
PROTEIN_ID QJW38729.1
SOURCE Cellulosimicrobium protaetiae
ORGANISM Cellulosimicrobium protaetiae
Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae;
Cellulosimicrobium.
REFERENCE 1 (bases 1 to 152586)
AUTHORS Le Han,H., Nguyen,T.T.H., Li,Z., Shin,N.R. and Kim,S.G.
TITLE Cellulosimicrobium protaetiae sp. nov., isolated from the gut of
the larva of Protaetia brevitarsis seulensis
JOURNAL Int J Syst Evol Microbiol 72 (3) (2022)
PUBMED 35348452
REFERENCE 2 (bases 1 to 152586)
AUTHORS Le Ho,H. and Kim,S.-G.
TITLE Direct Submission
JOURNAL Submitted (06-NOV-2019) Korean Collection for Type Cultures (KCTC),
Korea Research Institute of Bioscience & Biotechnology (KRIBB), 181
Ipsin-gil, Jeongeup-si, Jeollabuk-do 56212, Republic of Korea
REFERENCE 3 (bases 1 to 152586)
AUTHORS Ho,H. and Kim,S.-G.
TITLE Direct Submission
JOURNAL Submitted (17-APR-2020) Korean Collection for Type Cultures (KCTC),
Korea Research Institute of Bioscience & Biotechnology (KRIBB), 181
Ipsin-gil, Jeongeup-si, Jeollabuk-do 56212, Korea, Republic of
COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##Genome-Assembly-Data-START##
Assembly Date :: JUL-2019
Assembly Method :: HGAP v. 3.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 178.0x
Sequencing Technology :: PacBio RSII; Illumina HiSeq
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 04/28/2020 06:45:21
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 4.11
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes (total) :: 4,140
CDSs (total) :: 4,077
Genes (coding) :: 4,001
CDSs (with protein) :: 4,001
Genes (RNA) :: 63
rRNAs :: 3, 3, 3 (5S, 16S, 23S)
complete rRNAs :: 3, 3, 3 (5S, 16S, 23S)
tRNAs :: 51
ncRNAs :: 3
Pseudo Genes (total) :: 76
CDSs (without protein) :: 76
Pseudo Genes (ambiguous residues) :: 0 of 76
Pseudo Genes (frameshifted) :: 11 of 76
Pseudo Genes (incomplete) :: 66 of 76
Pseudo Genes (internal stop) :: 2 of 76
Pseudo Genes (multiple problems) :: 3 of 76
CRISPR Arrays :: 1
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Cellulosimicrobium protaetiae"
/mol_type="genomic DNA"
/strain="BI34"
/isolation_source="intestine from larvae"
/host="wax moth"
/type_material="type strain of Cellulosimicrobium
protaetiae"
/db_xref="taxon:2587808"
/plasmid="pCPRO01"
/country="South Korea: Jeongeup"
/collection_date="2019-04"
protein /locus_tag="FIC82_020300"
/inference="COORDINATES: protein
motif:HMM:NF016497.1,HMM:NF024777.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
BEGIN
1 MTRTTRSRRP LAALALLPLL ACTLPAVAAP ASAIDGTTDG LLVAYDFSEV GGTVLHDVAD
61 AGGNQHGTVT GGAAWRNGAM TFTGSNYVTL PDALLAGRTD ATVVVEALPS ASTLTSSAFL
121 WNLGGSGNDR TGQFFVHTQG HRASISPTNY AAEQTAQAPQ PFAADRWQSI TASISANDDG
181 ATSTLSLFVD GVQVAQKTNS TVGLDDLRTH TKNLIGASAY SGDAKFTGAI SSFRVYDRAL
241 SAAEITDLAA ADAATSAQET LAGIDLGDTS AVSQDLDLPT SGGVTWTTSN AGVVEADGTI
301 HRIETSSQDA TLTATVDVRG ETAQRMFPVT VAALPPAAER AAADLDAVAL IGLDDVRDHL
361 ALPLTGEEYG SAITWSAEPA GVVSTEREGE RAPGFVTRPA FGDPDVEVVL TAHAEGTDVV
421 RTFDATVKAL PAPEDPSAYL FAHFTAGRSP NVSNEQIYFA TSEDGTSWTD LNDEKPVLTS
481 TVGETGARDP FLVRAPGGDK FYLLATDLST AKYGWHFTPD NPGSKSLVVW ESTDLVNWSA
541 PRLADVASRI PNAGAAWAPE ATYDPATGEY MVYWATISGA PADHPLGNTL GDPMNMYYAT
601 TRDFVTFSDP VKWIDRQTSI IDTTMLEVDG VFYRASGDGQ ITIERSTDPY AVTISPGAME
661 ENPGGWERVS TLRDIFGNDG YSGNRLEGPE LFAYNPEDWQ TDGSGAKVPT WGLIADRYNS
721 GQGYMPFRST DLAGDSPLSA GGAWSVGDDI DFGAVLKRHG TILPITQNEH DRLQRAYGDA
781 PALTVTATTR CVAGKNVVAA TITNEGEAAA TVSVSSSYGE RTGVVIGAGA SKTQTFSTRL
841 AEVSAGSVSV SVDDGGAVVE ATYQASHCG
//