LOCUS QJW38720.1 807 aa PRT BCT 29-DEC-2022
DEFINITION Cellulosimicrobium protaetiae cellulase family glycosylhydrolase
protein.
ACCESSION CP052758-60
PROTEIN_ID QJW38720.1
SOURCE Cellulosimicrobium protaetiae
ORGANISM Cellulosimicrobium protaetiae
Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae;
Cellulosimicrobium.
REFERENCE 1 (bases 1 to 152586)
AUTHORS Le Han,H., Nguyen,T.T.H., Li,Z., Shin,N.R. and Kim,S.G.
TITLE Cellulosimicrobium protaetiae sp. nov., isolated from the gut of
the larva of Protaetia brevitarsis seulensis
JOURNAL Int J Syst Evol Microbiol 72 (3) (2022)
PUBMED 35348452
REFERENCE 2 (bases 1 to 152586)
AUTHORS Le Ho,H. and Kim,S.-G.
TITLE Direct Submission
JOURNAL Submitted (06-NOV-2019) Korean Collection for Type Cultures (KCTC),
Korea Research Institute of Bioscience & Biotechnology (KRIBB), 181
Ipsin-gil, Jeongeup-si, Jeollabuk-do 56212, Republic of Korea
REFERENCE 3 (bases 1 to 152586)
AUTHORS Ho,H. and Kim,S.-G.
TITLE Direct Submission
JOURNAL Submitted (17-APR-2020) Korean Collection for Type Cultures (KCTC),
Korea Research Institute of Bioscience & Biotechnology (KRIBB), 181
Ipsin-gil, Jeongeup-si, Jeollabuk-do 56212, Korea, Republic of
COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##Genome-Assembly-Data-START##
Assembly Date :: JUL-2019
Assembly Method :: HGAP v. 3.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 178.0x
Sequencing Technology :: PacBio RSII; Illumina HiSeq
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 04/28/2020 06:45:21
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 4.11
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes (total) :: 4,140
CDSs (total) :: 4,077
Genes (coding) :: 4,001
CDSs (with protein) :: 4,001
Genes (RNA) :: 63
rRNAs :: 3, 3, 3 (5S, 16S, 23S)
complete rRNAs :: 3, 3, 3 (5S, 16S, 23S)
tRNAs :: 51
ncRNAs :: 3
Pseudo Genes (total) :: 76
CDSs (without protein) :: 76
Pseudo Genes (ambiguous residues) :: 0 of 76
Pseudo Genes (frameshifted) :: 11 of 76
Pseudo Genes (incomplete) :: 66 of 76
Pseudo Genes (internal stop) :: 2 of 76
Pseudo Genes (multiple problems) :: 3 of 76
CRISPR Arrays :: 1
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Cellulosimicrobium protaetiae"
/mol_type="genomic DNA"
/strain="BI34"
/isolation_source="intestine from larvae"
/host="wax moth"
/type_material="type strain of Cellulosimicrobium
protaetiae"
/db_xref="taxon:2587808"
/plasmid="pCPRO01"
/country="South Korea: Jeongeup"
/collection_date="2019-04"
protein /locus_tag="FIC82_020240"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013837611.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
BEGIN
1 MARLHAHRSG PALGAVVALV ATTALAALPA SGAETEADTE PVEAGIVVDR VEGMPDDFAS
61 GVDVSTVLSL EESGVVFRDE SGEPADLFTV LADAGVNSVR IRVWNDPYDG EGRGYGGGNL
121 DTARAVQIGE RATAAGMSVL VDFHYSDFWA DPAKYTVPKA WKNLTAAQRA DAAGEFTTAA
181 LNEFKAAGVD VTMVQVGNET NSGVAGLTSW PERAALFSAG SAAVREVFPA ALVAVHYTNP
241 ERAGFYADVA AKLAEYGVDY DVFASSYYPF WHGSLDNLTS VLTQVAQTYD KKVMVAETSW
301 VNTLEEGDGQ RNVIYTQPTQ YPVSVQGQAT AIRDVIQAVV DVPDGAGIGV YYWEPAWLPV
361 GPPDQIEANR QLWQQFGSGW ASSYAADYDP TGDTAENWGG SGWENQALFD YQGHPLESLN
421 VFTYARTGTT APREVASIQQ PSITIADGEP VTLPATVTVT YNDGEQEPLE VTWSGAQDWI
481 RGAGTYTISG TTSAGSTTAT VTVQAPNYVT NPGFEAGTAP WSIAGTGAAI TGDDPFAGSK
541 ALHFWSAAPY TFTATQQLTG LPAGDYLLSA QAQGDALGGE LTLTGTGTSE SSEPFDLTGW
601 HNWSAPQVPV TVSDDGTATV RISANLPAGA WGTLDEVSLT KASGTTADTT ALQAALGQVE
661 EVERALYTPA SLAGLDHAAE VARVVLAAAA AVQGDVDQAT ILVVDALEEL RQNGGPPIET
721 TAEVRCLAGK SFVAVRATNV GAEPIDVTIT TPYGSRKFEQ IDPRGNAYQS FASRAAFIPA
781 GTVEILATAR EFRTTRTVAD YDARACG
//