LOCUS QJW38480.1 766 aa PRT BCT 29-DEC-2022
DEFINITION Cellulosimicrobium protaetiae AAA family ATPase protein.
ACCESSION CP052757-2652
PROTEIN_ID QJW38480.1
SOURCE Cellulosimicrobium protaetiae
ORGANISM Cellulosimicrobium protaetiae
Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae;
Cellulosimicrobium.
REFERENCE 1 (bases 1 to 4631595)
AUTHORS Le Han,H., Nguyen,T.T.H., Li,Z., Shin,N.R. and Kim,S.G.
TITLE Cellulosimicrobium protaetiae sp. nov., isolated from the gut of
the larva of Protaetia brevitarsis seulensis
JOURNAL Int J Syst Evol Microbiol 72 (3) (2022)
PUBMED 35348452
REFERENCE 2 (bases 1 to 4631595)
AUTHORS Le Ho,H. and Kim,S.-G.
TITLE Direct Submission
JOURNAL Submitted (06-NOV-2019) Korean Collection for Type Cultures (KCTC),
Korea Research Institute of Bioscience & Biotechnology (KRIBB), 181
Ipsin-gil, Jeongeup-si, Jeollabuk-do 56212, Republic of Korea
REFERENCE 3 (bases 1 to 4631595)
AUTHORS Ho,H. and Kim,S.-G.
TITLE Direct Submission
JOURNAL Submitted (17-APR-2020) Korean Collection for Type Cultures (KCTC),
Korea Research Institute of Bioscience & Biotechnology (KRIBB), 181
Ipsin-gil, Jeongeup-si, Jeollabuk-do 56212, Korea, Republic of
COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##Genome-Assembly-Data-START##
Assembly Date :: JUL-2019
Assembly Method :: HGAP v. 3.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 178.0x
Sequencing Technology :: PacBio RSII; Illumina HiSeq
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 04/28/2020 06:45:21
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 4.11
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes (total) :: 4,140
CDSs (total) :: 4,077
Genes (coding) :: 4,001
CDSs (with protein) :: 4,001
Genes (RNA) :: 63
rRNAs :: 3, 3, 3 (5S, 16S, 23S)
complete rRNAs :: 3, 3, 3 (5S, 16S, 23S)
tRNAs :: 51
ncRNAs :: 3
Pseudo Genes (total) :: 76
CDSs (without protein) :: 76
Pseudo Genes (ambiguous residues) :: 0 of 76
Pseudo Genes (frameshifted) :: 11 of 76
Pseudo Genes (incomplete) :: 66 of 76
Pseudo Genes (internal stop) :: 2 of 76
Pseudo Genes (multiple problems) :: 3 of 76
CRISPR Arrays :: 1
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Cellulosimicrobium protaetiae"
/mol_type="genomic DNA"
/strain="BI34"
/isolation_source="intestine from larvae"
/host="wax moth"
/type_material="type strain of Cellulosimicrobium
protaetiae"
/db_xref="taxon:2587808"
/country="South Korea: Jeongeup"
/collection_date="2019-04"
protein /locus_tag="FIC82_013465"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_006290493.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
BEGIN
1 MDGRVTGGAR ARRPAEGRDS VGRNDELRLE QEVVDTLYAR LDELRAAARA RLDGVRRSGP
61 SGSPQNRSER DAFATLYEDR VAQLDAVEDR LAFGRLDLED GTLRYVGRIG LTDAEHTSLL
121 TDWRAPAAQS FYRATAAHPD GVVRRRHLVT RGRAVTGLED ELLDLDAHDV VAGTTLSGEG
181 ALLAAMAAGR TGRMGDIVAT IQAEQDTIIR SGLAGALVVQ GGPGTGKTAV ALHRAAYLLY
241 AHRRLLERSG VLLVGPSHSF LRYIDQVLPS LGETGVVSTT VSDLLPGVVA DGAEDPRVSR
301 VKGRAVMARA VRRAVRARER VPAQDVPVRL DGHDLLIRRR DVRDAIAKAR RTHKPHNLAR
361 VTFVREMLSR LVDQYGRALG EPLAGEDRTI ALEDLRSHRD VRVALNLAWL PLTPERLVED
421 LWTKPHRLAE AAPELSPDDR RLLERPKGSP WTPADVPLLD EAAELLGEDD QAERAEAAAR
481 AAQHARDLEY ARQVLESSGA GGGIVGADVL AERFSASGPR LTTAERAAQD RTWTYGHVVV
541 DEAQELSAMA WRMLVRRCPT RSFTVVGDVA QTSSLAGARS WKGMLDPVFR DAWRLAELTV
601 NYRTPASVAD AARRAALAAG LPVSPLTSAR DVEDALRVVE SAPDDLYARV RDAADAARAE
661 FVAAESGRVA VVAAAPAVPS LRVALGLEDD GPDAPVAVLD PVQVKGLEFD AVVLVEPSEV
721 AAGPSGASDL YVAMTRPTQR LVVVHARPLP EGVDTPGPDG RGPSAG
//