LOCUS QJW37750.1 878 aa PRT BCT 29-DEC-2022
DEFINITION Cellulosimicrobium protaetiae discoidin domain-containing
protein protein.
ACCESSION CP052757-3502
PROTEIN_ID QJW37750.1
SOURCE Cellulosimicrobium protaetiae
ORGANISM Cellulosimicrobium protaetiae
Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae;
Cellulosimicrobium.
REFERENCE 1 (bases 1 to 4631595)
AUTHORS Le Han,H., Nguyen,T.T.H., Li,Z., Shin,N.R. and Kim,S.G.
TITLE Cellulosimicrobium protaetiae sp. nov., isolated from the gut of
the larva of Protaetia brevitarsis seulensis
JOURNAL Int J Syst Evol Microbiol 72 (3) (2022)
PUBMED 35348452
REFERENCE 2 (bases 1 to 4631595)
AUTHORS Le Ho,H. and Kim,S.-G.
TITLE Direct Submission
JOURNAL Submitted (06-NOV-2019) Korean Collection for Type Cultures (KCTC),
Korea Research Institute of Bioscience & Biotechnology (KRIBB), 181
Ipsin-gil, Jeongeup-si, Jeollabuk-do 56212, Republic of Korea
REFERENCE 3 (bases 1 to 4631595)
AUTHORS Ho,H. and Kim,S.-G.
TITLE Direct Submission
JOURNAL Submitted (17-APR-2020) Korean Collection for Type Cultures (KCTC),
Korea Research Institute of Bioscience & Biotechnology (KRIBB), 181
Ipsin-gil, Jeongeup-si, Jeollabuk-do 56212, Korea, Republic of
COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##Genome-Assembly-Data-START##
Assembly Date :: JUL-2019
Assembly Method :: HGAP v. 3.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 178.0x
Sequencing Technology :: PacBio RSII; Illumina HiSeq
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 04/28/2020 06:45:21
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 4.11
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes (total) :: 4,140
CDSs (total) :: 4,077
Genes (coding) :: 4,001
CDSs (with protein) :: 4,001
Genes (RNA) :: 63
rRNAs :: 3, 3, 3 (5S, 16S, 23S)
complete rRNAs :: 3, 3, 3 (5S, 16S, 23S)
tRNAs :: 51
ncRNAs :: 3
Pseudo Genes (total) :: 76
CDSs (without protein) :: 76
Pseudo Genes (ambiguous residues) :: 0 of 76
Pseudo Genes (frameshifted) :: 11 of 76
Pseudo Genes (incomplete) :: 66 of 76
Pseudo Genes (internal stop) :: 2 of 76
Pseudo Genes (multiple problems) :: 3 of 76
CRISPR Arrays :: 1
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Cellulosimicrobium protaetiae"
/mol_type="genomic DNA"
/strain="BI34"
/isolation_source="intestine from larvae"
/host="wax moth"
/type_material="type strain of Cellulosimicrobium
protaetiae"
/db_xref="taxon:2587808"
/country="South Korea: Jeongeup"
/collection_date="2019-04"
protein /locus_tag="FIC82_017780"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012888736.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
BEGIN
1 MHLRPTARLR LASLAAGVTA ACVAAPLVAA AAPVAAAADP VNLSQGKPAT ASSVQGDYVA
61 TRAVDGDLNT RWSSEFAEGQ WLQVDLGQVS TLTSVALSWE GAYGKGFRIE ASDDGTTWRT
121 LRTVTDGTGG QQTLPVSGTG RYVRVLGTER GTGYGYSLWE LQVFGTPGTD GGPVDPGGPD
181 DPGDPTGDDC TTNAALGKAA TASSAEGAYA AGLAVDGKAD TRWSSEFSDT QWLQVDLGSI
241 QPVCGIEIDW EGAYGKGFRV ETSDDGDLWR TLRTVTDGTG GKQVLDVTGS GRYVRLVGTE
301 RGTGWGYSIW ELRVLTGDGT GNPGTGEPIE GGGDLGPNVH VFGPGTPVAE IQAAVDAAYA
361 AQEESQFGLR RDQFLFEPGT YPVHVNVGFN TAVNGLGQDP DDVNITGGVW ADAEWFEGNA
421 TQNFWRSIEN LAVTPTGGDM RWAVSQAAPM RRIHVRGNLM LHSSRYGWAS GGFTADSIVD
481 GQVRGYTQQQ WYTRDSTLTG GWDGTLWNMV FSGTENAPPT TFPEPAVTTL DTTGTVREKP
541 YLYLDGDDYA VFVPSLREGT RGATWKNGST PGTSIPLDEF YVAQPGDAAD HINAALDQGL
601 NLLLTPGVYH LDETIEVNRA DTVVLGLGYA TIVPTAGQTA LQVGDVDGVR VASVLFDAGA
661 AESPSMLTVG TEGSTADHSD DPISIHDVFV RVGGAHAGKV DSAIVINADD TIIDHIWSWR
721 GDHGEGIGWD VNTADYGLVV NGDDVDGYGL FVEHYQKYNT LWNGERGRTI FYQNELPYDP
781 PNQAAWNHDG IRGWAAYKVA DDVKFHEAWG LGSYCVFTSD ASIVSDNGFE VPVTPGVKMH
841 SLLTVSLGGV GTYEHVINGV GPRASGVETI PAKVVSYP
//