LOCUS QJW35996.1 1847 aa PRT BCT 29-DEC-2022
DEFINITION Cellulosimicrobium protaetiae hypothetical protein protein.
ACCESSION CP052757-1401
PROTEIN_ID QJW35996.1
SOURCE Cellulosimicrobium protaetiae
ORGANISM Cellulosimicrobium protaetiae
Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae;
Cellulosimicrobium.
REFERENCE 1 (bases 1 to 4631595)
AUTHORS Le Han,H., Nguyen,T.T.H., Li,Z., Shin,N.R. and Kim,S.G.
TITLE Cellulosimicrobium protaetiae sp. nov., isolated from the gut of
the larva of Protaetia brevitarsis seulensis
JOURNAL Int J Syst Evol Microbiol 72 (3) (2022)
PUBMED 35348452
REFERENCE 2 (bases 1 to 4631595)
AUTHORS Le Ho,H. and Kim,S.-G.
TITLE Direct Submission
JOURNAL Submitted (06-NOV-2019) Korean Collection for Type Cultures (KCTC),
Korea Research Institute of Bioscience & Biotechnology (KRIBB), 181
Ipsin-gil, Jeongeup-si, Jeollabuk-do 56212, Republic of Korea
REFERENCE 3 (bases 1 to 4631595)
AUTHORS Ho,H. and Kim,S.-G.
TITLE Direct Submission
JOURNAL Submitted (17-APR-2020) Korean Collection for Type Cultures (KCTC),
Korea Research Institute of Bioscience & Biotechnology (KRIBB), 181
Ipsin-gil, Jeongeup-si, Jeollabuk-do 56212, Korea, Republic of
COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##Genome-Assembly-Data-START##
Assembly Date :: JUL-2019
Assembly Method :: HGAP v. 3.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 178.0x
Sequencing Technology :: PacBio RSII; Illumina HiSeq
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 04/28/2020 06:45:21
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 4.11
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes (total) :: 4,140
CDSs (total) :: 4,077
Genes (coding) :: 4,001
CDSs (with protein) :: 4,001
Genes (RNA) :: 63
rRNAs :: 3, 3, 3 (5S, 16S, 23S)
complete rRNAs :: 3, 3, 3 (5S, 16S, 23S)
tRNAs :: 51
ncRNAs :: 3
Pseudo Genes (total) :: 76
CDSs (without protein) :: 76
Pseudo Genes (ambiguous residues) :: 0 of 76
Pseudo Genes (frameshifted) :: 11 of 76
Pseudo Genes (incomplete) :: 66 of 76
Pseudo Genes (internal stop) :: 2 of 76
Pseudo Genes (multiple problems) :: 3 of 76
CRISPR Arrays :: 1
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Cellulosimicrobium protaetiae"
/mol_type="genomic DNA"
/strain="BI34"
/isolation_source="intestine from larvae"
/host="wax moth"
/type_material="type strain of Cellulosimicrobium
protaetiae"
/db_xref="taxon:2587808"
/country="South Korea: Jeongeup"
/collection_date="2019-04"
protein /locus_tag="FIC82_007075"
/inference="COORDINATES: protein
motif:HMM:NF012573.1,HMM:NF015083.1,HMM:NF016047.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
BEGIN
1 MSTPAAAVTD PDPSFRLTAH DLEFILKQIH VSEAHSAGGT LLCDEPTDRS GKCVPSPALP
61 FGLRTVDGSF NNLLAGQEEY GSADRPFPRH LGTTWREADP GPPFSPPNPP GATDVCAAGT
121 TCYSMFAPGS FVYDADPRVI SNLIVDQSAD NPAAVNAAES TEGGEVRPDG SVYIPNTAPD
181 EGLSAPFNAW FTFFGQFFDH GLDLVNKGGN GTLVVPLQPD DPLYDPASRT NFLVLTRATR
241 LPGPDGVVGT SDDEHNNQTT PWVDQNQTYT SHPAHQVFLR EYELRDGVPH DTGRLLDGTL
301 PGGGTGGLTT WADVKRQANE VLGIALTDAD VLNVPQVAVD LYGNFVPGPG GFPLLVTDED
361 GDPATEDPLN VEGDLADPVA TTNALGTAHA FLDDIAHGST PLFDADGNLV PQQFDDEGSP
421 IPPGVPLFNA DGSPVTDQSL AGYDNVSLDE HFVTGDGRGN ENIGLTAVHH VFHAEHNRLV
481 GYIDGVLAEN PELQKAYQGL EHQWPTKRSG DELPGPEDDD WSYEQRLFQA ARFATEMQYQ
541 HLVFEEFARK IQPNVDPIVF NENSYDATVD PAIVAEYAHV VYRFGHSMLT EEIDRTGFGT
601 QSVSLLDGFL NPRTYDDDGT LTPEQAAGAV VNGTTNQVAG QIDEHVIGTL RNNLLGLPLD
661 LATINMLRGR DTGTPGLQEA RRTFFATTGS PTLEPYESWY DFGVGLKNGN NFGRGGSNAS
721 LINFVAAYGT HPTILSANTV EAKRDAASLL VNGTLQGQEV TFRVGGGDRF ATAAQISAGY
781 FGTGVPVAYV TSGMNFPDAL AGGPAAAAGG GPVLLVQPGS IPDATSTELA RLQPQRIVVL
841 GGEGAVSQTV LNGLGTYTSG AVTRVFGADR YETAANISAT VFAPGVDVVY VASGENFPDA
901 LAGGAVAARD GAPILLVTQG SIPAAVQAEL DRLDPGRIVV LGGAGVVSPA VQTQLGTYTD
961 GGVTRLGGAD RYQTALLISQ YAYPSGAPAA FVATGSNFPD ALAAAPVAGL SGAPLLLVPP
1021 TAAPPGVLAE LARLGADRVT LLGGTGVISP AIQQQLTPPP PVPADLPADR LDFVHSTGAW
1081 ANQPDGLTTT GLENVDFWTG GLAEALDPFG GMLGSTFNFV FEKQLENLQF GDRFYYLFRN
1141 QGNQLFAALE ANSFAKLIQR NTDASLLPAD IFSVPDPSLD LENLPDPWPS QLTQMGDGTY
1201 RWDGDEHVEI HGNRTEADRI RGGQGDDALW GYGGNDRIEG GSGNDEIIGG PGDDILTDSF
1261 GDDNIKGGLG NDAINGGPGV NLLLASHGND FVVGGNDTPN DIFAGTGNDV VLGGAGRTNV
1321 FGGEGDDWIQ GGSHADLAQG DNANQFQNDT IGGNDVVVGG PGNDDIEGEG GDDVLVGRAF
1381 GTDRHEGAIG YDWVTYYGEN GGVDADLRFS TLQRPDVQAV RDRYDLVEAL SGGGGNDVLR
1441 GQGFGVDDIP DNEVPLHKMT QETLDLFPGL EAILRPGGGH EDYALRFMDD PLAADQDGQS
1501 NLLIGGPGSD LVEGRGGNDF IDGDAYLRVQ LAVGDERFDN AAQLQTRVFS GEINPGDISI
1561 VREIVEDDEA DGVIDTAVYQ FDREAYEVTD LGDGYTAVEH TGAAELEESD GRDVLRNVEM
1621 LQFGDGCLVL ATMEACPSFG SVTFAGQIDP PTEDLPLAAT VVFDDSLVQN PTNIRFAWQL
1681 GEGGEEWEPS ATGDTLPDAP NGRVDTFTPG DGDGGMLLRV VVTFRDDQGQ LRSIVSDALP
1741 AVVNVNDVPT QPVLSPEVVT VGSGLNLGGF TDGDGLEESS EAGITYTWQA STDGFATVRV
1801 LGNVVPTAFQ VTAAEAGHQI RVVVAYTDDQ GTVETVVSTV STVTGGP
//