LOCUS QJW34937.1 1438 aa PRT BCT 29-DEC-2022
DEFINITION Cellulosimicrobium protaetiae hypothetical protein protein.
ACCESSION CP052757-141
PROTEIN_ID QJW34937.1
SOURCE Cellulosimicrobium protaetiae
ORGANISM Cellulosimicrobium protaetiae
Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae;
Cellulosimicrobium.
REFERENCE 1 (bases 1 to 4631595)
AUTHORS Le Han,H., Nguyen,T.T.H., Li,Z., Shin,N.R. and Kim,S.G.
TITLE Cellulosimicrobium protaetiae sp. nov., isolated from the gut of
the larva of Protaetia brevitarsis seulensis
JOURNAL Int J Syst Evol Microbiol 72 (3) (2022)
PUBMED 35348452
REFERENCE 2 (bases 1 to 4631595)
AUTHORS Le Ho,H. and Kim,S.-G.
TITLE Direct Submission
JOURNAL Submitted (06-NOV-2019) Korean Collection for Type Cultures (KCTC),
Korea Research Institute of Bioscience & Biotechnology (KRIBB), 181
Ipsin-gil, Jeongeup-si, Jeollabuk-do 56212, Republic of Korea
REFERENCE 3 (bases 1 to 4631595)
AUTHORS Ho,H. and Kim,S.-G.
TITLE Direct Submission
JOURNAL Submitted (17-APR-2020) Korean Collection for Type Cultures (KCTC),
Korea Research Institute of Bioscience & Biotechnology (KRIBB), 181
Ipsin-gil, Jeongeup-si, Jeollabuk-do 56212, Korea, Republic of
COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##Genome-Assembly-Data-START##
Assembly Date :: JUL-2019
Assembly Method :: HGAP v. 3.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 178.0x
Sequencing Technology :: PacBio RSII; Illumina HiSeq
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 04/28/2020 06:45:21
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 4.11
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes (total) :: 4,140
CDSs (total) :: 4,077
Genes (coding) :: 4,001
CDSs (with protein) :: 4,001
Genes (RNA) :: 63
rRNAs :: 3, 3, 3 (5S, 16S, 23S)
complete rRNAs :: 3, 3, 3 (5S, 16S, 23S)
tRNAs :: 51
ncRNAs :: 3
Pseudo Genes (total) :: 76
CDSs (without protein) :: 76
Pseudo Genes (ambiguous residues) :: 0 of 76
Pseudo Genes (frameshifted) :: 11 of 76
Pseudo Genes (incomplete) :: 66 of 76
Pseudo Genes (internal stop) :: 2 of 76
Pseudo Genes (multiple problems) :: 3 of 76
CRISPR Arrays :: 1
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Cellulosimicrobium protaetiae"
/mol_type="genomic DNA"
/strain="BI34"
/isolation_source="intestine from larvae"
/host="wax moth"
/type_material="type strain of Cellulosimicrobium
protaetiae"
/db_xref="taxon:2587808"
/country="South Korea: Jeongeup"
/collection_date="2019-04"
protein /locus_tag="FIC82_000705"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/transl_table=11
BEGIN
1 MREPWVDVAL ARLPETRSCP ACAATLRSSR CDRCLLDLTG PLAFEVAAAS TEAADALSRR
61 QVALDALRAS QPEAAAWAAR AVVATPPGDA PPGVRAVPSG PPRAMRPLDA TGRGQAGPRT
121 SPVAQPPGPV RGPVRGPVPV RPATVGPVPP GSAGSPAGAV VPGAAPARSV GLQPVLAGAG
181 AGLLAVATVV FVFFTFADDL ALRALVTGVV TVLTVGAAVL LRSRGLRSSA EAVAALAVVL
241 AVVDVELALS AWARAGALDP VGTAVARASL LAAVVVGLGL VGDRARVRAW VTSAVVLGPL
301 VPLVAAPAAG APWGWAVALL ATACLTALAA PVAARSGARV GSALRGEQAV LGVVRTVAVP
361 LAVVVGLTVT APPGLPTGSG SAAVALGAAL AAALLRVSTA ERRWYAIGGA SAVLAGALLG
421 TGGDVVWVGL APAFAALAWF VVLALTTPRV VQAVRAAPTP AVGRSDTLLG GAVVAIVAAV
481 PAVAIAGLRA AEVLMTATTG TDAELGTAPL GVGVLTAASR DDGLGVGSDG AEILGGTLLG
541 LTAVLAVVSV AGRLALRTPQ PVPAPLPPGV RPVPLPTGAR PVPLPTGARS APAPGGWAPA
601 VSRLGAAPVV RTGRAFGPWL LLALVLTLAL DPRLAGVTSL ALLAVLAAAL VVATARPVAV
661 PAVPAVSPAP ASAPVPSGTA SDVAAGSAPG AVVRAVRRVL VHVLRPAARL LPDPRAAIRH
721 GVLPVGRAER RVWRAAAVAG TIAALLLLVA GSWVARPTAT VGAVVVGVLL LAARACAPRG
781 LHAVLVGTAY GYALLVLGVT LAWGGIGTVA VLCVVSGVAS LVALTVTLVP RVDRDSWWAV
841 LGVTAVPFGL GVLTVVDERS AWSVAACVAM LALEVVLVGS RRPGTVTGLR VLAAALVLPT
901 AAVAVVGAGA LVLPGSGSPV VLPVVAVLVA AALAGARPVT ERIGLGAGRV AVEAAAALTG
961 AIAVGLAFAR PAAGPDVAVA VLLLLAAGAG LAARDRDRRA EWWLAAALTT AALWTALAAA
1021 EVGLVEAYTA PPALAAVVTG ALLARRSRRW WELASAGLVL LVVPSVLALG ASPGAGDMRA
1081 LLLVAAGAGC VVVAATLRRA DAAGGAWRRA AALRLAGAGV LAATAGTVES VHVAHAAGGG
1141 AVFLVGFAWA LAAGAVALGG GLVAARGASG RATAVVRRWA VAPAAVLVVV GAVANVRPVW
1201 GVIATVWAVE VLLLVLLVLG VRRAVRGRLD LPPAWFTWLL ALAAAIGAWS PRELRVEVFS
1261 LPLGAGLLVA GYLALAAGTT SARGTGAGNP DAEGAAAGTA GGVTAPVRTT STLAGWPVGL
1321 AGSWRTLAPG ILALLGPSVL ATYTDARTWR AVLVIALALA AVLVGTRTHL AAPFLLGVAV
1381 LPVEILVVFV SQLGTRISAG PWMLTLAAAG GLLLIIATYY ERRIAAYDGA AAYVRDLR
//