LOCUS       QJU60397.1               890 aa    PRT              BCT 18-MAY-2020
DEFINITION  Sphingomonas sp. AP4-R1 bifunctional [glutamine synthetase]
            adenylyltransferase/[glutamine synthetase]-adenylyl-L-
            tyrosine phosphorylase protein.
ACCESSION   CP053346-374
PROTEIN_ID  QJU60397.1
SOURCE      Sphingomonas sp. AP4-R1
  ORGANISM  Sphingomonas sp. AP4-R1
            Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (bases 1 to 5252057)
  AUTHORS   Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
  TITLE     Genome sequencing of strain KACC 21605
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5252057)
  AUTHORS   Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2020) Agricultural Mircrobiology Division,
            National Institute of Agricultural Sciences, 166
            Nongsaengmyeong-ro, Iseo-myeon, Wanju-gun, Jeollabuk-do 55365,
            South Korea
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            This genome has a base modification file available.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: APR-2020
            Assembly Method        :: RS HGAP Assembly v. 3.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 99.0x
            Sequencing Technology  :: PacBio RSII
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 05/11/2020 21:04:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 4,788
            CDSs (total)                      :: 4,729
            Genes (coding)                    :: 4,613
            CDSs (with protein)               :: 4,613
            Genes (RNA)                       :: 59
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 116
            CDSs (without protein)            :: 116
            Pseudo Genes (ambiguous residues) :: 0 of 116
            Pseudo Genes (frameshifted)       :: 56 of 116
            Pseudo Genes (incomplete)         :: 58 of 116
            Pseudo Genes (internal stop)      :: 26 of 116
            Pseudo Genes (multiple problems)  :: 22 of 116
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingomonas sp. AP4-R1"
                     /mol_type="genomic DNA"
                     /strain="AP4-R1"
                     /host="Malus prunifolia (crab apple)"
                     /culture_collection="KACC:21605"
                     /db_xref="taxon:2735134"
                     /country="South Korea: Naju-si"
                     /collection_date="23-Oct-2019"
                     /collected_by="Jun Heo, Soon-Wo Kwon"
                     /identified_by="Jun Heo, Soon-Wo Kwon"
     protein         /locus_tag="HL653_01905"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019831641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MADFGGGIER AEAHAPFLRR LIARRRDVVD RLAGDGLSAT LAAARAESDA ESDTALALRR
       61 ERQAVALSVA LADLAGASFE TVTRALSDFA DHALDRAIHS IIEERGGEGA IGFGALALGK
      121 QGSRELNYSS DIDPILLFDP ATLWCRPREE PGEAAQRIAR RIVELLQQQT GDGYVLRVDL
      181 RLRPAAEATP LAVPIGLAIS HYETSALPWE RAAFIRARAA AGDVALGAGM LTHLRPFVWR
      241 RALDFGAIGE LRDLSRRIRD HHGKVRVPAP GYDVKRGRGG IREIEFFAQI HQLIHGGREP
      301 ALRVPATLDA LAALAEAGRI DPEEARTLGD TYRLLRTIEH RLQMVEDQQT HRLPEDPAAL
      361 DNVARLSGYA DGGDLIAALA PAAEVVGRIY DGLEPDEAPP LPETRSDLEQ ALAERGFPDP
      421 AHAAKRIETW RKGQARTTRS AAARAALEKV LPTLIAAFAE AADPHTALLR FDDLVARLPS
      481 ALNLFRLLEA QPNLLGLLVR VLSLAPALAA DLARRASLLD GLIDASALEA QPATDALAAQ
      541 FAKGEAREDY QGLLDRVRAE VSERRFALGV QAVAGALDPL AVGAGYARVA EAALRVLAAA
      601 TVAEFERTHG RIAGGELVIL ALGRFGGGTL THASDLDLVY LFTGDFLAES DGAKPLGATH
      661 YFNRLASRVS AAMSVPTASG PLYEIDTRLR PSGTQGLLAV SLDSFQRYQA ESAWTWEHMA
      721 LERARPVFGS AQAQAALAAI VEGALRRPHD PAKLAVDVVK MRGDIAAHKP AAGPFDVKAI
      781 DGGLIDAEFA VHFLQLRERI AITPDLARAA ATLEGEGLLA AGFADALALL TRMLIVLRLV
      841 APGGAAPAEP SHILVAEACG YSRWEEFLPA YDAARALIGG EWRRLAALGE
//