LOCUS       QJU56769.1               828 aa    PRT              BCT 18-MAY-2020
DEFINITION  Sphingomonas sp. AP4-R1 PhoX family phosphatase protein.
ACCESSION   CP053346-449
PROTEIN_ID  QJU56769.1
SOURCE      Sphingomonas sp. AP4-R1
  ORGANISM  Sphingomonas sp. AP4-R1
            Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (bases 1 to 5252057)
  AUTHORS   Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
  TITLE     Genome sequencing of strain KACC 21605
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5252057)
  AUTHORS   Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2020) Agricultural Mircrobiology Division,
            National Institute of Agricultural Sciences, 166
            Nongsaengmyeong-ro, Iseo-myeon, Wanju-gun, Jeollabuk-do 55365,
            South Korea
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            This genome has a base modification file available.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: APR-2020
            Assembly Method        :: RS HGAP Assembly v. 3.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 99.0x
            Sequencing Technology  :: PacBio RSII
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 05/11/2020 21:04:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 4,788
            CDSs (total)                      :: 4,729
            Genes (coding)                    :: 4,613
            CDSs (with protein)               :: 4,613
            Genes (RNA)                       :: 59
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 116
            CDSs (without protein)            :: 116
            Pseudo Genes (ambiguous residues) :: 0 of 116
            Pseudo Genes (frameshifted)       :: 56 of 116
            Pseudo Genes (incomplete)         :: 58 of 116
            Pseudo Genes (internal stop)      :: 26 of 116
            Pseudo Genes (multiple problems)  :: 22 of 116
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingomonas sp. AP4-R1"
                     /mol_type="genomic DNA"
                     /strain="AP4-R1"
                     /host="Malus prunifolia (crab apple)"
                     /culture_collection="KACC:21605"
                     /db_xref="taxon:2735134"
                     /country="South Korea: Naju-si"
                     /collection_date="23-Oct-2019"
                     /collected_by="Jun Heo, Soon-Wo Kwon"
                     /identified_by="Jun Heo, Soon-Wo Kwon"
     protein         /locus_tag="HL653_02280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MTDHSAAGHY DDGLIDTNTT ANPTIHEIVD QRYSRRQTLF GGISALTVAT LGGMVTACGG
       61 DNDAPGLGAG TVVNAGAAMT TSSGKAVTLT GSTANATAGA DAWTQVSGPT VTFDTRTGTT
      121 ATFIAPSVSA STVLTFRYAA TGSSGAITAD TTVTVTPAVL GFTAVAKSLD DVVKVPEGYS
      181 VTVLYRLGDP INTATAAFAN NGTDTGYSAR AGDHHDGMSY FGLAATGSAP DPTSNLRGLL
      241 VMNHENINQP YLHPNGATTV GGARPEGEAL KEMECHGISV VEITRGSATG TWSYVQAGAL
      301 NRRITPLTPM TFTGPVAGSA GLRTSFSPTG VAGRGTINNC ANGYMPWGTY ITCEENWAGY
      361 FRRDTGDVAA RGGATAKANV SLARYGIPEN RAGNYGWATV TPADTTSTIY RRWNITTLAG
      421 AAADGTGDYR NEASQFGWVV EIDPFTNTSV PRKRTALGRM NHEGCWVGRT VVGVRPAFYM
      481 GDDAQNEYIY KFVSATPWVA ADATPTDRLA TGDKYLNTGT LYVAKFNADG TGTWLPLIFG
      541 QGGVTAANPT YAFADQADVL INARLAADVL GATRMDRPEW TAINPVSGEM YCTLTNNSSR
      601 TVANTDTANP RAYTDPRING TVTNGNANGH IIRLRETGDT TEATTFAWDI YAFGAGSDLN
      661 PTNINLSGLD ATNDFSSPDG LWFGRTSNPT GLVSPVMWIE TDDGAYTDVT NCMLLAAQPG
      721 SVNDGATRTI TNTIGATTGT QSTRVGKVPG TSLRRFLVGC KECEITGIDS TPDGRSIFVN
      781 IQHPGENGTP SNITSNWPAN QSGTAAPGVR PRSATIVITK NDGGVVGL
//