LOCUS QEO15797.1 875 aa PRT BCT 10-SEP-2019
DEFINITION Agromyces intestinalis aminopeptidase N protein.
ACCESSION CP043505-3201
PROTEIN_ID QEO15797.1
SOURCE Agromyces intestinalis
ORGANISM Agromyces intestinalis
Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae;
Agromyces.
REFERENCE 1 (bases 1 to 3800200)
AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
TITLE Genome sequencing of strain KACC 19306
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3800200)
AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
TITLE Direct Submission
JOURNAL Submitted (01-SEP-2019) Agricultural Mircrobiology Division,
National Institute of Agricultural Sciences, 166
Nongsaengmyeong-ro, Iseo-myeon, Wanju-gun, Jeollabuk-do 55365,
Korea, Republic of
COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
This genome has a base modification file available.
##Genome-Assembly-Data-START##
Assembly Date :: AUG-2019
Assembly Method :: RS HGAP Assembly v. 3.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 174.0x
Sequencing Technology :: PacBio RSII; Illumina HiSeq
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 09/03/2019 16:08:18
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 4.9
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes (total) :: 3,466
CDSs (total) :: 3,410
Genes (coding) :: 3,349
CDSs (with protein) :: 3,349
Genes (RNA) :: 56
rRNAs :: 2, 2, 2 (5S, 16S, 23S)
complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)
tRNAs :: 47
ncRNAs :: 3
Pseudo Genes (total) :: 61
CDSs (without protein) :: 61
Pseudo Genes (ambiguous residues) :: 0 of 61
Pseudo Genes (frameshifted) :: 7 of 61
Pseudo Genes (incomplete) :: 55 of 61
Pseudo Genes (internal stop) :: 0 of 61
Pseudo Genes (multiple problems) :: 1 of 61
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Agromyces intestinalis"
/mol_type="genomic DNA"
/strain="KACC 19306"
/isolation_source="gut of larva"
/host="Protaetia brevitarsis seulensis"
/culture_collection="KACC:19306"
/type_material="type strain of Agromyces intestinalis"
/db_xref="taxon:2592652"
/country="South Korea: Jeonju"
/collection_date="2017"
/collected_by="Soo-Jin Kim, Soon-Wo Kwon"
/identified_by="Soo-Jin Kim, Jun Heo, Soon-Wo Kwon"
protein /gene="pepN"
/locus_tag="FLP10_16245"
/EC_number="3.4.11.2"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_010203074.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
BEGIN
1 MPAADLTRAE ADARARLITG PSYEVALDLT GGGDTFGSET VVRFGAEPGA STFIESTAVE
61 VHELVLNGRA LDAAEAIDGS RIRLDDLVAE NELRVVATRA YSNTGEGLHR FVDPVDGETY
121 LYTEFAVAEA NRVYAVFDQP DLKASVRFEI TAPAHWTVLS NAPSPEPVAA TAAPTSAAAS
181 DTGREASATW SFEPGPVISS YIVALVAGPY ASWRDSAASV DGRDVPLGLF TRRSLAQYAE
241 PEVMFELVRD GLAFYERAFG VPYPFGKYDQ IFVPEYNWGA MENVGAVTFN EGYLFRSRVS
301 DARREQRAIV VLHELSHMWF GNAVTMRWWN DLWLNESFAT WASTLATSQI TEFTGVWATF
361 ASDEKTHAAE QDQLPSTHPI VAEIRELGDV EVNFDAITYD KGASVLKQLV AWVGLDAFQL
421 GVGAYLAAHA GGNATLRDLL DELERASGRE LTSWSEVWLE TAGVNTLRAT IEADASGTIT
481 SASVEQSGAA QHPTLRPHRL ALGCYRLVDG SLVRTERFEL DIDGASTPVP DLVGHAVPDL
541 LLVNDDDLTY AKVRLDARSF ETAIEHLGDL ADPVARAVVL GSAWDSVRDA ELPATEFVQL
601 VLRSIGRETQ SAARSLALGR LETALSRYVA DDRRERLAAE AGDAIWAQAQ LAEAGSDAQL
661 QFVKAFTRLA ATESHAHVLA SLADGSLALD GLVVDLDLRW ELLIARAALG AADDPEIDAQ
721 LVEDDTAKGR QLAETARAAR PDQAVKDAAW ERVATDTTLS NDLARAIADG WLRAEPATLL
781 TTNVRRYFAM LQKVWSERGF TMGSLIVRRL FPAPLIDPEL ATLTRAWLEA NPEPAPLRRY
841 VAEHLAELER AIAARALDAA SAERATATEL PAVAN
//