LOCUS QEO15664.1 651 aa PRT BCT 10-SEP-2019
DEFINITION Agromyces intestinalis YhgE/Pip domain-containing protein protein.
ACCESSION CP043505-3044
PROTEIN_ID QEO15664.1
SOURCE Agromyces intestinalis
ORGANISM Agromyces intestinalis
Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae;
Agromyces.
REFERENCE 1 (bases 1 to 3800200)
AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
TITLE Genome sequencing of strain KACC 19306
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3800200)
AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
TITLE Direct Submission
JOURNAL Submitted (01-SEP-2019) Agricultural Mircrobiology Division,
National Institute of Agricultural Sciences, 166
Nongsaengmyeong-ro, Iseo-myeon, Wanju-gun, Jeollabuk-do 55365,
Korea, Republic of
COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
This genome has a base modification file available.
##Genome-Assembly-Data-START##
Assembly Date :: AUG-2019
Assembly Method :: RS HGAP Assembly v. 3.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 174.0x
Sequencing Technology :: PacBio RSII; Illumina HiSeq
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 09/03/2019 16:08:18
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 4.9
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes (total) :: 3,466
CDSs (total) :: 3,410
Genes (coding) :: 3,349
CDSs (with protein) :: 3,349
Genes (RNA) :: 56
rRNAs :: 2, 2, 2 (5S, 16S, 23S)
complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)
tRNAs :: 47
ncRNAs :: 3
Pseudo Genes (total) :: 61
CDSs (without protein) :: 61
Pseudo Genes (ambiguous residues) :: 0 of 61
Pseudo Genes (frameshifted) :: 7 of 61
Pseudo Genes (incomplete) :: 55 of 61
Pseudo Genes (internal stop) :: 0 of 61
Pseudo Genes (multiple problems) :: 1 of 61
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Agromyces intestinalis"
/mol_type="genomic DNA"
/strain="KACC 19306"
/isolation_source="gut of larva"
/host="Protaetia brevitarsis seulensis"
/culture_collection="KACC:19306"
/type_material="type strain of Agromyces intestinalis"
/db_xref="taxon:2592652"
/country="South Korea: Jeonju"
/collection_date="2017"
/collected_by="Soo-Jin Kim, Soon-Wo Kwon"
/identified_by="Soo-Jin Kim, Jun Heo, Soon-Wo Kwon"
protein /locus_tag="FLP10_15440"
/inference="COORDINATES: protein
motif:HMM:TIGR03061.1,HMM:TIGR03062.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
BEGIN
1 MSTRLQALLG TGVRRRRTRA AALLATVLVV PLAVAGIIAG ALGGADDRLD AIPAIVVNDD
61 EMVSMTLPDG TEQPVLAGRQ LVTELTGPDS AGFTWTISNG DEAADRLASG EAYAVLTIPA
121 DFSASVTSLG GADPTQAQLQ IRTDDAHGYL AGSVAQSVGT AMTAAFGQQL TAQYLEGFYS
181 QLAGFGGSLG EAADGAGQLA TGASGLAEGV GQLSGGVAQA ASGATDAAAG AAAYADGVRQ
241 YTQGVDGIAS GLGELSAGAA GLDEISNQWD AYTGGIAQGV DQVEQQVGPV ADRFAALLAE
301 HPELLEQYPQ LAEAAGAIDG VRTQLGQLAT GGQQLAAASR GAIDGVQGGI DGLAGGAAQL
361 ATGSAGLRDG ATGLASGVGE LANGLGQLST GGREAAAGAG QLADGTRTFA DGLASGAEQA
421 KALTDLDAER TAKVVSEPVV VDAARDHEID GTGGIIAMMF APIGLWIGAL AMFLVFRPFG
481 REALRSTAST GGLVWRTLAR AGLVALVQAA AVVALVHTTL GVTWSVLPQT LAFSALLALA
541 FTAIHAFLTV ALGRGGAIVS LVLLALQLAA TGGLLPVEVL SGPFQAISPL LPLTWAVDGM
601 QGIVAGAGGA GVAGAAGVLA AMAAVAIAGT ALVVGRRRGI RSIGFAATAL G
//