LOCUS QEO15293.1 723 aa PRT BCT 10-SEP-2019 DEFINITION Agromyces intestinalis RNA degradosome polyphosphate kinase protein. ACCESSION CP043505-2629 PROTEIN_ID QEO15293.1 SOURCE Agromyces intestinalis ORGANISM Agromyces intestinalis Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agromyces. REFERENCE 1 (bases 1 to 3800200) AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W. TITLE Genome sequencing of strain KACC 19306 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3800200) AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W. TITLE Direct Submission JOURNAL Submitted (01-SEP-2019) Agricultural Mircrobiology Division, National Institute of Agricultural Sciences, 166 Nongsaengmyeong-ro, Iseo-myeon, Wanju-gun, Jeollabuk-do 55365, Korea, Republic of COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Date :: AUG-2019 Assembly Method :: RS HGAP Assembly v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 174.0x Sequencing Technology :: PacBio RSII; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 09/03/2019 16:08:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 3,466 CDSs (total) :: 3,410 Genes (coding) :: 3,349 CDSs (with protein) :: 3,349 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 61 CDSs (without protein) :: 61 Pseudo Genes (ambiguous residues) :: 0 of 61 Pseudo Genes (frameshifted) :: 7 of 61 Pseudo Genes (incomplete) :: 55 of 61 Pseudo Genes (internal stop) :: 0 of 61 Pseudo Genes (multiple problems) :: 1 of 61 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Agromyces intestinalis" /mol_type="genomic DNA" /strain="KACC 19306" /isolation_source="gut of larva" /host="Protaetia brevitarsis seulensis" /culture_collection="KACC:19306" /type_material="type strain of Agromyces intestinalis" /db_xref="taxon:2592652" /country="South Korea: Jeonju" /collection_date="2017" /collected_by="Soo-Jin Kim, Soon-Wo Kwon" /identified_by="Soo-Jin Kim, Jun Heo, Soon-Wo Kwon" protein /locus_tag="FLP10_13300" /EC_number="2.7.4.1" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_012039192.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MTDTLDADRT SSDFDDDFEP FDVEGAPELP AERYLDRELS WLAFNQRVLE LAEDPRQPVL 61 ERANFLAIFA SNLDEFFMVR VAGLKRRIVT GLAVPTNVGR APADVLSDIS RAAHELQERH 121 ARVYQELVKP ALAEAGIRVV SWDELGAAER THLAEFFASQ IFPVLMPLAV DPAHPFPYIS 181 GLSLNLSVRV RNSRTGRVEF ARVKVPQMLP RFVQVSADET VDDARYIALE ELISNHLGDL 241 FPGMEVLDHH VFRVTRNEDV EIEEDETENL IKALEKELLR RRFGPPIRLE VSDDMDDVTL 301 ELLVRELDIS DQEVFRLPAP LDLGGLFDLS RIDRPELHYP TQVPTTNAQL LPGEPNQQAD 361 IFAAVARKDV LLHHPYESFA TSVQAFLEQA AADPHVLAIK QTLYRTSGDS PIVEALIDAA 421 ESGKQVLALV EIKARFDEAA NITWARKLEK AGVHVVYGLV GLKTHCKLAL VIRQEQGRLR 481 HYSHIGTGNY NPKTSRIYED LGLLTADDQV GKDLTRLFNE LSGYAIEKKF KRLLVAPLHL 541 RKGLLKLIAQ EAQNAREGKP ARIRIKVNSM VDEAIIDALY RASNAGVPVE VWVRGICSLR 601 PGIEGLSENI RVRSILGRYL EHSRIFSFAG GGEPQVYIGS ADMMHRNLDR RVEALVRLTD 661 PDHLREVEGF FDLAMDERTS SWHLDSDGTW VRHSSDAAGH PLDDLQNTLM QQTAHRVRPG 721 IRR //