LOCUS QEO15251.1 591 aa PRT BCT 10-SEP-2019
DEFINITION Agromyces intestinalis sensor histidine kinase protein.
ACCESSION CP043505-2584
PROTEIN_ID QEO15251.1
SOURCE Agromyces intestinalis
ORGANISM Agromyces intestinalis
Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae;
Agromyces.
REFERENCE 1 (bases 1 to 3800200)
AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
TITLE Genome sequencing of strain KACC 19306
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3800200)
AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
TITLE Direct Submission
JOURNAL Submitted (01-SEP-2019) Agricultural Mircrobiology Division,
National Institute of Agricultural Sciences, 166
Nongsaengmyeong-ro, Iseo-myeon, Wanju-gun, Jeollabuk-do 55365,
Korea, Republic of
COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
This genome has a base modification file available.
##Genome-Assembly-Data-START##
Assembly Date :: AUG-2019
Assembly Method :: RS HGAP Assembly v. 3.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 174.0x
Sequencing Technology :: PacBio RSII; Illumina HiSeq
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 09/03/2019 16:08:18
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 4.9
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes (total) :: 3,466
CDSs (total) :: 3,410
Genes (coding) :: 3,349
CDSs (with protein) :: 3,349
Genes (RNA) :: 56
rRNAs :: 2, 2, 2 (5S, 16S, 23S)
complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)
tRNAs :: 47
ncRNAs :: 3
Pseudo Genes (total) :: 61
CDSs (without protein) :: 61
Pseudo Genes (ambiguous residues) :: 0 of 61
Pseudo Genes (frameshifted) :: 7 of 61
Pseudo Genes (incomplete) :: 55 of 61
Pseudo Genes (internal stop) :: 0 of 61
Pseudo Genes (multiple problems) :: 1 of 61
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Agromyces intestinalis"
/mol_type="genomic DNA"
/strain="KACC 19306"
/isolation_source="gut of larva"
/host="Protaetia brevitarsis seulensis"
/culture_collection="KACC:19306"
/type_material="type strain of Agromyces intestinalis"
/db_xref="taxon:2592652"
/country="South Korea: Jeonju"
/collection_date="2017"
/collected_by="Soo-Jin Kim, Soon-Wo Kwon"
/identified_by="Soo-Jin Kim, Jun Heo, Soon-Wo Kwon"
protein /locus_tag="FLP10_13070"
/inference="COORDINATES: protein motif:HMM:PF07730.11"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
BEGIN
1 MSPGRNGRIA RRSAVIAAVI ALSLAMEVSG FLATPVDERG EVSYTTLHAA VPLVFAACAG
61 VAWRIGPTRL PSRLMILFVV LWIPQSFYRV IEDLGWLWPF VRGVDLGWAV VAGILVLVYP
121 RGWLDDRFGR WVAGIALTAS VVNLLAVLLL AGPGDAPCDC APNPYRVADA PLLFTIGDYA
181 YRFIGVALAF TIAVRLLVRW MRGSVPARAV AFLMPVALLA WVTTLAAQAI VYAMSTTSET
241 VLQTVSLLAI ASVPVSYVAG VAHAGNMRSR VADLMRITRE GADRGIWAES LARTLRDDSV
301 RVFWWDEERG RYEDAQGVPI HPEDSDPRGT HSLLPVASPQ GVPIALIRHD RVLTENMRLL
361 EGVSSALRLS VDNGRLRSEV ERTLEQVRQS RQRIVEAGIE ARRRIERDLH DGAQQQLVLL
421 GMRMRIAANR ATELGDDELA HELEQAIEIL NQGLRELREL AHGIHPSLLS SGGLVLAVPE
481 LAGRVPIPVE VDVQAEGRLP EIIETTAYFA IAEALANVAK HAQATRAWVR AHVVDGELVL
541 TVRDNGRGGA SLGAGTGVVG IGDRVDAVGG RLELDSPPGA GTTLTVRIPL P
//