LOCUS QEO15246.1 1003 aa PRT BCT 10-SEP-2019
DEFINITION Agromyces intestinalis hypothetical protein protein.
ACCESSION CP043505-2579
PROTEIN_ID QEO15246.1
SOURCE Agromyces intestinalis
ORGANISM Agromyces intestinalis
Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae;
Agromyces.
REFERENCE 1 (bases 1 to 3800200)
AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
TITLE Genome sequencing of strain KACC 19306
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3800200)
AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
TITLE Direct Submission
JOURNAL Submitted (01-SEP-2019) Agricultural Mircrobiology Division,
National Institute of Agricultural Sciences, 166
Nongsaengmyeong-ro, Iseo-myeon, Wanju-gun, Jeollabuk-do 55365,
Korea, Republic of
COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
This genome has a base modification file available.
##Genome-Assembly-Data-START##
Assembly Date :: AUG-2019
Assembly Method :: RS HGAP Assembly v. 3.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 174.0x
Sequencing Technology :: PacBio RSII; Illumina HiSeq
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 09/03/2019 16:08:18
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 4.9
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes (total) :: 3,466
CDSs (total) :: 3,410
Genes (coding) :: 3,349
CDSs (with protein) :: 3,349
Genes (RNA) :: 56
rRNAs :: 2, 2, 2 (5S, 16S, 23S)
complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)
tRNAs :: 47
ncRNAs :: 3
Pseudo Genes (total) :: 61
CDSs (without protein) :: 61
Pseudo Genes (ambiguous residues) :: 0 of 61
Pseudo Genes (frameshifted) :: 7 of 61
Pseudo Genes (incomplete) :: 55 of 61
Pseudo Genes (internal stop) :: 0 of 61
Pseudo Genes (multiple problems) :: 1 of 61
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Agromyces intestinalis"
/mol_type="genomic DNA"
/strain="KACC 19306"
/isolation_source="gut of larva"
/host="Protaetia brevitarsis seulensis"
/culture_collection="KACC:19306"
/type_material="type strain of Agromyces intestinalis"
/db_xref="taxon:2592652"
/country="South Korea: Jeonju"
/collection_date="2017"
/collected_by="Soo-Jin Kim, Soon-Wo Kwon"
/identified_by="Soo-Jin Kim, Jun Heo, Soon-Wo Kwon"
protein /locus_tag="FLP10_13045"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/transl_table=11
BEGIN
1 MASARIAAAR TRARVGVLAG VALISFLAAF TTGALADWTA TAPSTAIGEG LAAVDGRAGA
61 VRWQTRLAAD APAQAEAAAS VLDRELAADG AVWARSVAAE PVAARAAGTA DTVADAPGLV
121 LVADPDVPGR AQLLDGEWAS GPTGGALQAD AAGRLGVDVG DVIAIGDGTT AITVTGLWRA
181 TDATDPAWFG DPFAAAGGTA DAVGPLVVDE SVVADLRAAV FVRWTATVPP GPADADALRA
241 LGASISEVEP ALRDDPAVGD SGIAESGGLE ATLVRLLAAA AAARAIAPLP LAIAAIAAIA
301 ALWRLGALLA EARRGETVLL RARGATGTQL ATGTAAEALW VALPAAALGA LLAEALLALL
361 RPGEPRTAVA AWIAAGAVVV AAVALLAGVA RRAAARPLVR GAGDEPGRAV RGGAIGGTVL
421 LAALAALSLW RFLSLGSPLV VGRDGVSVDP LAAAAPVLVL LALALVVLAL ARPAGMVLER
481 LATRRPGLSP SLPMRRLGRA PELYAAATLT TVIGVASLTL AAALAGAWHA TDARTAALRT
541 GGDVRVELAG RDLVTGADPL ALVAPFADLE GVDADVPALR TEVRIGSDAR ELVAVEAATL
601 GTVAADDGDA GANLAAALTG GGAPGGLPLP VGARRISVEL AVAAPPGAAG EIAVSAWLLG
661 PQGAATVLEL GGLSISAGSG EVSADLPATG SALIGIEARR PNLEGAGDPR VTVSAVRIDG
721 TALADAPVGD LALSARTPVG RVAAERADGA VPVVLESGLA AGIRADPGDE LVFRIVAGGA
781 EVHARVVAVA PALPGSGALL ADLGATQAAA FAAGGAVPEH AERWLASAEP DRVADALDRE
841 QPLPLSASTR ADVSTAGIVG PAVDALAWGA AGAVAFALAA FAALAAAIGR TRTGELAVLR
901 ALGVPPRRQG GARFAELAAA AGGAIVGGVL VGLAVSALIV PALARAAVPG ARETLVAPEA
961 GEWAWFAGAL LATAVLALGV AAVSAASTAG RARHAVRHGE EAA
//