LOCUS QEO15227.1 1007 aa PRT BCT 10-SEP-2019
DEFINITION Agromyces intestinalis hypothetical protein protein.
ACCESSION CP043505-2558
PROTEIN_ID QEO15227.1
SOURCE Agromyces intestinalis
ORGANISM Agromyces intestinalis
Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae;
Agromyces.
REFERENCE 1 (bases 1 to 3800200)
AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
TITLE Genome sequencing of strain KACC 19306
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3800200)
AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
TITLE Direct Submission
JOURNAL Submitted (01-SEP-2019) Agricultural Mircrobiology Division,
National Institute of Agricultural Sciences, 166
Nongsaengmyeong-ro, Iseo-myeon, Wanju-gun, Jeollabuk-do 55365,
Korea, Republic of
COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
This genome has a base modification file available.
##Genome-Assembly-Data-START##
Assembly Date :: AUG-2019
Assembly Method :: RS HGAP Assembly v. 3.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 174.0x
Sequencing Technology :: PacBio RSII; Illumina HiSeq
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 09/03/2019 16:08:18
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 4.9
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes (total) :: 3,466
CDSs (total) :: 3,410
Genes (coding) :: 3,349
CDSs (with protein) :: 3,349
Genes (RNA) :: 56
rRNAs :: 2, 2, 2 (5S, 16S, 23S)
complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)
tRNAs :: 47
ncRNAs :: 3
Pseudo Genes (total) :: 61
CDSs (without protein) :: 61
Pseudo Genes (ambiguous residues) :: 0 of 61
Pseudo Genes (frameshifted) :: 7 of 61
Pseudo Genes (incomplete) :: 55 of 61
Pseudo Genes (internal stop) :: 0 of 61
Pseudo Genes (multiple problems) :: 1 of 61
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Agromyces intestinalis"
/mol_type="genomic DNA"
/strain="KACC 19306"
/isolation_source="gut of larva"
/host="Protaetia brevitarsis seulensis"
/culture_collection="KACC:19306"
/type_material="type strain of Agromyces intestinalis"
/db_xref="taxon:2592652"
/country="South Korea: Jeonju"
/collection_date="2017"
/collected_by="Soo-Jin Kim, Soon-Wo Kwon"
/identified_by="Soo-Jin Kim, Jun Heo, Soon-Wo Kwon"
protein /locus_tag="FLP10_12940"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_018171681.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
BEGIN
1 MTKATRRGIL AVVVAATLLA LGAGIGVVVG DALGISVEGS DRMHPAEPDV SPVEAAVPPP
61 AIASLDVPTT ARVGVAVDEL LDAVAAAPTR EGELALAVEV EATATPTGTD ADDAYRLEGD
121 ASSLRVIAAT ESGATRAIYD LAAHVRAGRS VAAELGEHDA SALPVRLVDL GAVGVEADPT
181 EWERGDDYSH VSDAFRDVYL ADAPYVDEAA LAEAYDDWDA FLRRSVAEGA NAVAWPGFIE
241 YVDFADAEDG PVYADGDPHP ARAAALREAF GPFWDRAAEL GAKVYLRTDM LALSPELDAY
301 FDRRFGGADT EDPELWQVYA DALDALYAEQ PSLSGVMIRI GEGGDIYATP GWDFTSELAV
361 RSVAAVRAML TALTTQAEAS DREVIFRTWS VGIGDVGDMH TDPASYQRVL DGISSPALIV
421 STKYMAGDFF SWHPLNETLK IGDQRRIVEF QSRREFEGFG AFPNDLGPEF QWALGELLAA
481 NPNIEGVWTW TQDGGPWRAG PMTLHLKAGF WQLADLNTRL SLALARDPGT HVSQVTIDWA
541 KQFSDDPATV SAIAEAMAIS REPIEHGLYL SAFAEQHTTA LGLQPPPQML LFQWDILTGD
601 TATLDVIATI VGDRREESIR EADEAVAAAE RMRSAIEATD AASWRDPAER SAFIGAIGYE
661 VDTLGLLGAY REMFLEQARW HDTESDEAHG AWRAARDDYV AAAAAHLAAY EGDVDHPAWN
721 LTAAQLGVDR GDRDLAMAWA ARVLLVLALV WVVVGAASVR TRLVRRPGAA GARASWLAAT
781 RPWRAREATL GLDSLDLWLL FLVPVALLVA TRAVQTSFLS WTHLAVVLGA WVVFAIVVRL
841 FVWRRSPWPV IAAVGGVVVL RCVVTLVALS FTGPGGYWYA FWTDPVQRVA YIAIAFALFV
901 WVFVAAGWAL STQIGVRRAT GSVLAAVGAG LALPSLVVAI VGLEQALTLW NDEMGLLPWG
961 MSRILGITTF LEIPEESAWY AAGFGALVAL VGALLAVRWR RPRAIAD
//