LOCUS       QEO15120.1              1301 aa    PRT              BCT 10-SEP-2019
DEFINITION  Agromyces intestinalis DNA-directed RNA polymerase subunit
            beta' protein.
ACCESSION   CP043505-2447
PROTEIN_ID  QEO15120.1
SOURCE      Agromyces intestinalis
  ORGANISM  Agromyces intestinalis
            Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae;
            Agromyces.
REFERENCE   1  (bases 1 to 3800200)
  AUTHORS   Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
  TITLE     Genome sequencing of strain KACC 19306
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3800200)
  AUTHORS   Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-SEP-2019) Agricultural Mircrobiology Division,
            National Institute of Agricultural Sciences, 166
            Nongsaengmyeong-ro, Iseo-myeon, Wanju-gun, Jeollabuk-do 55365,
            Korea, Republic of
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            This genome has a base modification file available.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: AUG-2019
            Assembly Method        :: RS HGAP Assembly v. 3.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 174.0x
            Sequencing Technology  :: PacBio RSII; Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/03/2019 16:08:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.9
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,466
            CDSs (total)                      :: 3,410
            Genes (coding)                    :: 3,349
            CDSs (with protein)               :: 3,349
            Genes (RNA)                       :: 56
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 61
            CDSs (without protein)            :: 61
            Pseudo Genes (ambiguous residues) :: 0 of 61
            Pseudo Genes (frameshifted)       :: 7 of 61
            Pseudo Genes (incomplete)         :: 55 of 61
            Pseudo Genes (internal stop)      :: 0 of 61
            Pseudo Genes (multiple problems)  :: 1 of 61
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Agromyces intestinalis"
                     /mol_type="genomic DNA"
                     /strain="KACC 19306"
                     /isolation_source="gut of larva"
                     /host="Protaetia brevitarsis seulensis"
                     /culture_collection="KACC:19306"
                     /type_material="type strain of Agromyces intestinalis"
                     /db_xref="taxon:2592652"
                     /geo_loc_name="South Korea: Jeonju"
                     /collection_date="2017"
                     /collected_by="Soo-Jin Kim, Soon-Wo Kwon"
                     /identified_by="Soo-Jin Kim, Jun Heo, Soon-Wo Kwon"
     protein         /gene="rpoC"
                     /locus_tag="FLP10_12385"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017885339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MLDATTFDEL RIGLATAEDI RKWSYGEVKK PETINYRTLK PEKDGLFGEQ IFGPSRDWEC
       61 ACGKYKRVRF KGIVCERCGV EVTKSSVRRE RMGHIELAAP VTHIWYFKGV PSRLGYLLDM
      121 APKDLEKVIY FAAYMVIDID EDGRHADLPG LENELRLEID TIGKQRDARI ATLMERKETE
      181 LAELEADGAK ADVRKRAEAA ADKEMAGVRK SADEQIAHLE RVWEDFRTLK VGDLKPEDSV
      241 FQELQDRFGM YFDAYMGAEA IKKRLESFDL AAEADDLHLQ IAEGKGQKKI RAIKRLKVVN
      301 SFLQTGNSPA AMVLDVVPVI PPELRPMVQL DGGRFATSDL NDLYRRVINR NNRLRRLLDL
      361 GAPEIIVNNE KRMLQEAVDA LFDNGRRGRP VTGTGNRALK SLSDMLKGKQ GRFRQNLLGK
      421 RVDYSGRSVI VVGPQLKLHQ CGLPKQMALE LFKPFVIKRL IDLQHAQNIK AAKRMVERSR
      481 PQVWDVLEEI IRERPVLLNR APTLHRLGIQ AFEPQLVEGK AIQLHPLVCA AFNADFDGDQ
      541 MAVHLPLSVE AQAEARILML ASNNILKPSD GRPVTLPSQD MIIGLHHLTT QRDGANGEGR
      601 AFSSIAEAIL AFDQNRPGDI KLDLGAKVKI RLDGLHFAEG DEPEGFEQGK PFLFETTLGR
      661 AIFNEALPAD YPFFNKQAGK SQISQIVNDL AERYPKTEVA ATLDRIKDAG FRWATRSGVT
      721 VALSDIVELP QKQEIVSKYE KQAAKVQSQF DKGLTTDLER RQELIQIWTK ATDEVAKAMQ
      781 EEFANNPDNT INRMVTSGAR GNWLQVRNIA GMRGLVNNPK GEIIPRPIIS SYREGLSVAE
      841 YFIATHGARK GLADTALRTA DSGYLTRRLV DVSQDVIIRE DDCGTTKGLD LPIAAVDAAT
      901 GELVRDPNVE NSVFARSLAA DAVNAAGEVI AEAGSDVGDV LIDKLVAAGV ESIKVRSVLT
      961 CESAVGVCAA CYGRSLATGK LVDLGEAVGI IAAQSIGEPG TQLTMRTFHT GGSASADDIT
     1021 QGLPRVQELF EARTPKGASP IVEAPGRITI DETERQRKVI LTPDNGDEPI AYNVLKRSTL
     1081 LVEDGQHVEL GQQIIVGTVD PKEVLRVKGV REVQKHLVDG VQEVYRSQGV PIHDKHIEVI
     1141 VRQMLRKVTV VDHGDTDLLP GELVDRSRYN EINRAALTEG KRTASARQEV MGITKASLAT
     1201 ESWLSAASFQ ETTRVLTEAA MQGKSDPLVG LKENVIIGKL IPAGTGLAKY RNVTVEATEE
     1261 ARAERYPNRI FADDATFSEG DLSFVDFDAF TNDDFTPGNY S
//