LOCUS QEO14530.1 795 aa PRT BCT 10-SEP-2019
DEFINITION Agromyces intestinalis hypothetical protein protein.
ACCESSION CP043505-1764
PROTEIN_ID QEO14530.1
SOURCE Agromyces intestinalis
ORGANISM Agromyces intestinalis
Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae;
Agromyces.
REFERENCE 1 (bases 1 to 3800200)
AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
TITLE Genome sequencing of strain KACC 19306
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3800200)
AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
TITLE Direct Submission
JOURNAL Submitted (01-SEP-2019) Agricultural Mircrobiology Division,
National Institute of Agricultural Sciences, 166
Nongsaengmyeong-ro, Iseo-myeon, Wanju-gun, Jeollabuk-do 55365,
Korea, Republic of
COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
This genome has a base modification file available.
##Genome-Assembly-Data-START##
Assembly Date :: AUG-2019
Assembly Method :: RS HGAP Assembly v. 3.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 174.0x
Sequencing Technology :: PacBio RSII; Illumina HiSeq
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 09/03/2019 16:08:18
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 4.9
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes (total) :: 3,466
CDSs (total) :: 3,410
Genes (coding) :: 3,349
CDSs (with protein) :: 3,349
Genes (RNA) :: 56
rRNAs :: 2, 2, 2 (5S, 16S, 23S)
complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)
tRNAs :: 47
ncRNAs :: 3
Pseudo Genes (total) :: 61
CDSs (without protein) :: 61
Pseudo Genes (ambiguous residues) :: 0 of 61
Pseudo Genes (frameshifted) :: 7 of 61
Pseudo Genes (incomplete) :: 55 of 61
Pseudo Genes (internal stop) :: 0 of 61
Pseudo Genes (multiple problems) :: 1 of 61
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Agromyces intestinalis"
/mol_type="genomic DNA"
/strain="KACC 19306"
/isolation_source="gut of larva"
/host="Protaetia brevitarsis seulensis"
/culture_collection="KACC:19306"
/type_material="type strain of Agromyces intestinalis"
/db_xref="taxon:2592652"
/country="South Korea: Jeonju"
/collection_date="2017"
/collected_by="Soo-Jin Kim, Soon-Wo Kwon"
/identified_by="Soo-Jin Kim, Jun Heo, Soon-Wo Kwon"
protein /locus_tag="FLP10_08945"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/transl_table=11
BEGIN
1 MEAGSNASRR LRRLPDTARR GLVLLAAGLM VAGVAVAPRV AAGLAGSSVD EVAVAGSKSD
61 ASAGAPAAAA PSEVDETLVV RIAPSAPGDV DPAAPLTVDV EVSNRTGEAL AASIVRVTAP
121 ATPISDTAAL DAWTAEPAGA VVGEAPLRPI GVGGTASATV SIPADALGAQ AGAPIVAVGA
181 ELVVDGETAA SGSAAFPSTT PTPARAVSVA VVGAITLPAQ VTGVADAEQL ATWTGPVGLL
241 TRQLDSLAGR PVAIGIDPRI IVSIRLLGTD APPAAVAWLE RLAAVPNEVF PLSYADSDLA
301 LQSQLGVGVL PVGAFDDLLD PARFETGAAD ATGGMPAADA AAEASARPAA AGTAPAEAVG
361 EASETPAPTT PADPSEPDEP GTVPSTEDLF AWPYTRTDIA WPAEGTVAAG DLATFRNAGL
421 TTTILAAANV DPGSDGNAAS SLDGETALVS DARITGALRA AATAPSEVAQ REASARLLAE
481 LALRAAAPGD RAVLLATLPR TAGENATRVA AALDRLVESP VAATASLADI VGAPPTARTL
541 TDGTEPEPRP SYAQRMLDAE AGQVAFATVL DDPTPLTAPV RRELLALLDI AWIDQPDEWA
601 SAVGGWLVER SATVDAISIV PSSPVNVLST ETGVPTTIEN RLPYAANVIV HVAPSNGRLI
661 VDEEVPVTLA PESRSNVRVP VEAGVGNGQV VLTVTLHSPT GVAVGSAVDI PANVQADWEG
721 VGATVLAILV VAFFAFGLWR TIRRRRRARA EEAAEAGAID ADASNDTHDE KDASNGMHAD
781 DPAVQPADAT ESRDG
//