LOCUS QEO14431.1 833 aa PRT BCT 10-SEP-2019
DEFINITION Agromyces intestinalis hypothetical protein protein.
ACCESSION CP043505-1647
PROTEIN_ID QEO14431.1
SOURCE Agromyces intestinalis
ORGANISM Agromyces intestinalis
Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae;
Agromyces.
REFERENCE 1 (bases 1 to 3800200)
AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
TITLE Genome sequencing of strain KACC 19306
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3800200)
AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
TITLE Direct Submission
JOURNAL Submitted (01-SEP-2019) Agricultural Mircrobiology Division,
National Institute of Agricultural Sciences, 166
Nongsaengmyeong-ro, Iseo-myeon, Wanju-gun, Jeollabuk-do 55365,
Korea, Republic of
COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
This genome has a base modification file available.
##Genome-Assembly-Data-START##
Assembly Date :: AUG-2019
Assembly Method :: RS HGAP Assembly v. 3.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 174.0x
Sequencing Technology :: PacBio RSII; Illumina HiSeq
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 09/03/2019 16:08:18
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 4.9
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes (total) :: 3,466
CDSs (total) :: 3,410
Genes (coding) :: 3,349
CDSs (with protein) :: 3,349
Genes (RNA) :: 56
rRNAs :: 2, 2, 2 (5S, 16S, 23S)
complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)
tRNAs :: 47
ncRNAs :: 3
Pseudo Genes (total) :: 61
CDSs (without protein) :: 61
Pseudo Genes (ambiguous residues) :: 0 of 61
Pseudo Genes (frameshifted) :: 7 of 61
Pseudo Genes (incomplete) :: 55 of 61
Pseudo Genes (internal stop) :: 0 of 61
Pseudo Genes (multiple problems) :: 1 of 61
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Agromyces intestinalis"
/mol_type="genomic DNA"
/strain="KACC 19306"
/isolation_source="gut of larva"
/host="Protaetia brevitarsis seulensis"
/culture_collection="KACC:19306"
/type_material="type strain of Agromyces intestinalis"
/db_xref="taxon:2592652"
/country="South Korea: Jeonju"
/collection_date="2017"
/collected_by="Soo-Jin Kim, Soon-Wo Kwon"
/identified_by="Soo-Jin Kim, Jun Heo, Soon-Wo Kwon"
protein /locus_tag="FLP10_08345"
/inference="COORDINATES: protein motif:HMM:PF02156.13"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
BEGIN
1 MRPGRTIPLI ALLGALALTA GPAVGAGTPA AAGAADDSAE EMRLVLDDFS GYTDDAALDS
61 AYTRNANGGQ NTATLVDSPF GDGLGQAMRF DYSFTSGYSG RYRAVNGYWP GLRAVELWVQ
121 HSAPGQDVLL QLSDGASYEA HLNAVPGFDA TSTAPQHLRI PIEAFARKEG TGTGTLNPKG
181 VTTFALYVNQ VVGGSGGTIV LDEISLVFDE LPDLPSVAFD DTHLVADGVS NLVTLLNRDA
241 TLPAGAKIVQ VSYASSNPDV VPDFDRPAPK ADFVGEGTAT VQLQQVRLFL DGTTFAVDLD
301 TELEVEVRNL PAPVDVIEYF RDLTGHGVLS AMHHDQGYAN PATADVLHQR VANEFGVYPA
361 LYSADFLTGN TVAQRQNMIG EVIRQWRNGN LVQIMFHVSP PQYTVAQEAE GNWGGDQAHE
421 TLPSPNRIYS YLYNDQWAEL MTDGTPLNTN WKLRMDEYAR YLQQLEDAGV TVMLRPFHEM
481 QQHVFWWGGR PGLEGSAGLY RMFHDYLENE KGLTNIVWVW NIQDLPTDYG WADGDAKFDR
541 YEGLDGGLAE YDADDWNSFN PGADYYDILS VDFYDEAGYE PRHYDQAERI AAADGGKPIW
601 IGETFTFPSQ EVVAAQPDWA LAMPWGVRTW NYNTHDAMAT WYENSIGASG LPRFATLDTS
661 KPKPPIGEPV AAGEASMTPD LEGRIGVSAT RVAAGDTVEI SLGAERAGEY AAAVLYSEPR
721 VLGGWQQSSD EGTIAAAIPA DTEPGVHRLA AQDASGAVIG WVAIEILADP ANEEPAEPQP
781 PATGEADDAA GSVAGADGRS LATTGWTATW ALLTGAALAL AGAFVLVLRR RTT
//