LOCUS QEO14376.1 1039 aa PRT BCT 10-SEP-2019
DEFINITION Agromyces intestinalis AAA family ATPase protein.
ACCESSION CP043505-1589
PROTEIN_ID QEO14376.1
SOURCE Agromyces intestinalis
ORGANISM Agromyces intestinalis
Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae;
Agromyces.
REFERENCE 1 (bases 1 to 3800200)
AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
TITLE Genome sequencing of strain KACC 19306
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3800200)
AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
TITLE Direct Submission
JOURNAL Submitted (01-SEP-2019) Agricultural Mircrobiology Division,
National Institute of Agricultural Sciences, 166
Nongsaengmyeong-ro, Iseo-myeon, Wanju-gun, Jeollabuk-do 55365,
Korea, Republic of
COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
This genome has a base modification file available.
##Genome-Assembly-Data-START##
Assembly Date :: AUG-2019
Assembly Method :: RS HGAP Assembly v. 3.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 174.0x
Sequencing Technology :: PacBio RSII; Illumina HiSeq
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 09/03/2019 16:08:18
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 4.9
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes (total) :: 3,466
CDSs (total) :: 3,410
Genes (coding) :: 3,349
CDSs (with protein) :: 3,349
Genes (RNA) :: 56
rRNAs :: 2, 2, 2 (5S, 16S, 23S)
complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)
tRNAs :: 47
ncRNAs :: 3
Pseudo Genes (total) :: 61
CDSs (without protein) :: 61
Pseudo Genes (ambiguous residues) :: 0 of 61
Pseudo Genes (frameshifted) :: 7 of 61
Pseudo Genes (incomplete) :: 55 of 61
Pseudo Genes (internal stop) :: 0 of 61
Pseudo Genes (multiple problems) :: 1 of 61
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Agromyces intestinalis"
/mol_type="genomic DNA"
/strain="KACC 19306"
/isolation_source="gut of larva"
/host="Protaetia brevitarsis seulensis"
/culture_collection="KACC:19306"
/type_material="type strain of Agromyces intestinalis"
/db_xref="taxon:2592652"
/country="South Korea: Jeonju"
/collection_date="2017"
/collected_by="Soo-Jin Kim, Soon-Wo Kwon"
/identified_by="Soo-Jin Kim, Jun Heo, Soon-Wo Kwon"
protein /locus_tag="FLP10_08055"
/inference="COORDINATES: protein
motif:HMM:PF00196.17,HMM:PF13191.4"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
BEGIN
1 MKQSLTDASS ARSLAADPRS DVGGAWHDET VTTSVSSPEM VGRQADLSWL EGLLDEARQS
61 APRTGVLGGE AGIGKTRLIA EFTRRLDDDV RVLAGQCVDL GEVAAPYAPV KAALRSLVAE
121 LGPDAVLDAV GPGRAGLVAL LPELAGPEAS AGTPMGGPEA TGRLHEAIAV LLETISRERT
181 TVLVIEDLHW VDAATLALLR FLMRALTSSR VLIVLTYRTE DIGRGHPVRG FLTEIERDRW
241 VDRRELSRLT RAQVRKLARV LMTDDPTAAQ VDSVYGRSEG VPFFVEELIG IGACRVGTST
301 LPDTLRDLLL ARYEPLSEAT QSLLRLISTG GVRVPHALLE DVFPGTPDEL DRAARDAVLA
361 GVLIVDGEQY AFRHALVREA ILADLLPGER ARFHAAYADA YERLSAAGGR RLAAEISFHW
421 LGAHNATKAF PATIQAMREA RASAAYATAA QLGERAISLW DVVPDPVAAA GMDKIELMGR
481 TTTYLRNAGE SERALALVKA AIAECPDDNA RLARLLRDQA LVVASLGRDG SIPILREALA
541 RVAAIPSPDF ETSRLRASVM TALAGRLMID GQIDEAIDIA EEAHALAIEF DTDRSASVAR
601 NVASVSRISR GEVAEGLAGL EEARRLAHGD GAALLRYWVN ASDARYLVGD HESAVQHAEQ
661 GLERARAQGL ERSSGVILAS NAVDPLQALG EWQRADELID RALALDPPGP FRVYLLRARI
721 WARLWRGDPE GAAAEFRGVR AIVAPVMAVE AQTRLGVGRL MAELALESGD LAEARSAVGI
781 GVDESATHHL GYVLPYLWTS ARLIETARRD TAAAEAAGLD AGALTALEER VREQLADVTT
841 WPTYAVWAPF VEAELTEPGD EQAVDAWRAA VEAATHPASL QYLDAYARLR LGEAVLATGE
901 RQLARAELRA ARDTAERDGV GLVVRHVDRV AEAAGLSVSA AGAGDEASAA SSPAAAAVPA
961 TDDTATDGAG HPPDDPGLDE LTARERQVLG LIAEGLSNRQ IGERLYISGK TASVHVSAIL
1021 RKLGASTRTE AAVRAGALR
//