LOCUS QEO14166.1 499 aa PRT BCT 10-SEP-2019 DEFINITION Agromyces intestinalis lipopolysaccharide biosynthesis protein protein. ACCESSION CP043505-1351 PROTEIN_ID QEO14166.1 SOURCE Agromyces intestinalis ORGANISM Agromyces intestinalis Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agromyces. REFERENCE 1 (bases 1 to 3800200) AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W. TITLE Genome sequencing of strain KACC 19306 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3800200) AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W. TITLE Direct Submission JOURNAL Submitted (01-SEP-2019) Agricultural Mircrobiology Division, National Institute of Agricultural Sciences, 166 Nongsaengmyeong-ro, Iseo-myeon, Wanju-gun, Jeollabuk-do 55365, Korea, Republic of COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Date :: AUG-2019 Assembly Method :: RS HGAP Assembly v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 174.0x Sequencing Technology :: PacBio RSII; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 09/03/2019 16:08:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 3,466 CDSs (total) :: 3,410 Genes (coding) :: 3,349 CDSs (with protein) :: 3,349 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 61 CDSs (without protein) :: 61 Pseudo Genes (ambiguous residues) :: 0 of 61 Pseudo Genes (frameshifted) :: 7 of 61 Pseudo Genes (incomplete) :: 55 of 61 Pseudo Genes (internal stop) :: 0 of 61 Pseudo Genes (multiple problems) :: 1 of 61 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Agromyces intestinalis" /mol_type="genomic DNA" /strain="KACC 19306" /isolation_source="gut of larva" /host="Protaetia brevitarsis seulensis" /culture_collection="KACC:19306" /type_material="type strain of Agromyces intestinalis" /db_xref="taxon:2592652" /geo_loc_name="South Korea: Jeonju" /collection_date="2017" /collected_by="Soo-Jin Kim, Soon-Wo Kwon" /identified_by="Soo-Jin Kim, Jun Heo, Soon-Wo Kwon" protein /locus_tag="FLP10_06845" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_016903302.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MAIDERPPSL GASASRGAAV TLGAQLVRVL VQLAGIVVLA RLLTPADYGV LAMVLAIIGV 61 GEVFRDFGLS AAAVQAREVT HAQRTNLFWI NTGIGALLAV AVCAASGPIA AFYGDPRLQP 121 VAIALSATFL LNGLATQFRA DLNRRMRFMR LSSAEIAGQI AGLVVGVWLA LGGAGYGALV 181 AQQLVVAAAT LVALVAVTGW WPGLPSRGVP MRGFLRFGGN LVASQLVAYA SRNVDSVVIG 241 ATVGASALGL YNRAFQLMLM PLNQVNAPST RVALPVLSRL QDSPARYAEF IGLGQAFMLN 301 LVGAILAFGC AQAGPLIDLA LGAQWEPAVP IFRILAVAGF FQAAGYATYW VFLSKGLTGA 361 HLAYTLATRP VMIGLIVLGS FWGVLGVAAV FAIATAVLWP IALWWAGRVS DAPVGMLWRN 421 GVRAFAVHAT AGAASFAATA WLPDAAWALR LAVGALAFAG ALGVAALALR PFRDDVRRMV 481 AIRRYFRAGG AQPDPGEAG //