LOCUS QEO14137.1 2094 aa PRT BCT 10-SEP-2019
DEFINITION Agromyces intestinalis pullulanase-type alpha-1,6-glucosidase
protein.
ACCESSION CP043505-1315
PROTEIN_ID QEO14137.1
SOURCE Agromyces intestinalis
ORGANISM Agromyces intestinalis
Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae;
Agromyces.
REFERENCE 1 (bases 1 to 3800200)
AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
TITLE Genome sequencing of strain KACC 19306
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3800200)
AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
TITLE Direct Submission
JOURNAL Submitted (01-SEP-2019) Agricultural Mircrobiology Division,
National Institute of Agricultural Sciences, 166
Nongsaengmyeong-ro, Iseo-myeon, Wanju-gun, Jeollabuk-do 55365,
Korea, Republic of
COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
This genome has a base modification file available.
##Genome-Assembly-Data-START##
Assembly Date :: AUG-2019
Assembly Method :: RS HGAP Assembly v. 3.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 174.0x
Sequencing Technology :: PacBio RSII; Illumina HiSeq
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 09/03/2019 16:08:18
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 4.9
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes (total) :: 3,466
CDSs (total) :: 3,410
Genes (coding) :: 3,349
CDSs (with protein) :: 3,349
Genes (RNA) :: 56
rRNAs :: 2, 2, 2 (5S, 16S, 23S)
complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)
tRNAs :: 47
ncRNAs :: 3
Pseudo Genes (total) :: 61
CDSs (without protein) :: 61
Pseudo Genes (ambiguous residues) :: 0 of 61
Pseudo Genes (frameshifted) :: 7 of 61
Pseudo Genes (incomplete) :: 55 of 61
Pseudo Genes (internal stop) :: 0 of 61
Pseudo Genes (multiple problems) :: 1 of 61
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Agromyces intestinalis"
/mol_type="genomic DNA"
/strain="KACC 19306"
/isolation_source="gut of larva"
/host="Protaetia brevitarsis seulensis"
/culture_collection="KACC:19306"
/type_material="type strain of Agromyces intestinalis"
/db_xref="taxon:2592652"
/country="South Korea: Jeonju"
/collection_date="2017"
/collected_by="Soo-Jin Kim, Soon-Wo Kwon"
/identified_by="Soo-Jin Kim, Jun Heo, Soon-Wo Kwon"
protein /gene="pulA"
/locus_tag="FLP10_06665"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013837951.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
BEGIN
1 MTRSTRVRRW LATIVAGALG ASLIGAAVIA GPGAAAADEP RTFALVGSLQ TELGCPGDWQ
61 PECAATELAP TATPGVYAAD FTIPAGDWEY KVAVNDAWDE AYGLNGGGDN IPLTVAGDTE
121 IRVVFDDTLK KVGLEATDAT LRGAYDEASD ASLVDAPVRQ AGSDEVFYFV MTDRFENGDS
181 SNDEGGLTGD ALTTGYDPTH KGFYQGGDLA GLRSQLDYIE GLGTTAIWLT PSFKNQPVQG
241 EGANASAGYH GYWVTDFTQI DPHLGTNDEL GDLIADAHDR GIKVYFDIIT NHTADVIDYA
301 EGEYSYIEQA TEPYRDAEGN PIDLADYAGA GAPPFPALDA ATSFPYTPVL DPGEETLKVP
361 AWLNDPTLYH NRGDSTWEGE SVTYGDFVGL DDLMTEHPTV VNGFVDVYEE WIDLGIDGFR
421 IDTAKHVNFE FWQQWSAQVL DYARTVAGKP DFFMFGEVYD ADPVKLSPYV RDTDMNSVLD
481 FTFQSQAVSF AAGNSAKNLQ SLFAGDDYYT TPHSSATALP TFLGNHDMGR VGYFLQNTDA
541 PLARDELAHD LLFLTRGQPV VYYGDEQGFA GTGGDQSARQ TMFASQVDEY TGQSLVTGEP
601 FGTGAHQSTD APLYEHIAEL SALRQAHPAL ATGAQVERYV DSGAGVYAFS RVDRADRVEY
661 LVAVNNATET RTVEVPTLTD AGVFSPLYVD GDGAADGAIT ADAEGVASVT VPALGAVVYT
721 ADRPVTAPDA GLAISVATPA AGAGVRGVTP VAADVDLGTW QETSFAWRIA GDESDAAWHA
781 LGTAEDTSPR VFHDTAGLTT GTLLEYRAIS TDAAGHRSAA STYASVGNAV NLVEVDEPEQ
841 PIELVTVPGN HNAAMGCAGD WAPGCEAAKL TLRADGVYAG TFDLPAGDYE YKVAVNGSWD
901 VNYGQGGVPG GANVAYHHDG GPITFYWNPV THLATSSAQG PILTVPGSFQ SEIGCPGDWA
961 PDCLASMLFD SDGDGVYEFT TTSIPAGAYE AKVAHGMSWG ENYGVDGVRD GANYTFTTKD
1021 GEQVTFRYTL ATHVLEIEVA NPPLPGAGEA RAQWIDADTV AWPAALLGGA SADGLSWTLE
1081 HSADAGLAIG DEGAVTGATG DAVRLTLDAA GLTDAQLARF PQLGGGAYLS LKVDGVDRAA
1141 VQRLLTEQLA VAQRSGEADA TDAPLTAFTG VQVPGVLDDL YAEAVASVDL GVSGRGDDTV
1201 ATVWAPTAQS VVLERWDVGA TGDPALVEAS FDPSTGTWAT APGALDAGDE YRWRLEVYQP
1261 STEAIETNSV TDPYSTALTV NSTRTVVVDL DDPSISPELW TDTPTPVVEH AVDRAIYELH
1321 VRDFSITDET VPEAERGTYR AFTRDSAGTA QLRELAAAGI NTVHLLPTFD IATIEERRDA
1381 QATADCDLAS FGPASTEQQA CLASIRDLDG FNWGYDPYHY QAPEGSYAVD PDGGARVGEF
1441 REMVGALHSM GLQVVLDEVY NHTSASGQAE TSVLDRVVPG YYQRLNAAGA VETSTCCQNV
1501 ATEHSVAQKL MVDSVVLWAK EYKVDGFRFD LMGHHSKENL LAVRAALDEL TLERDGVDGS
1561 AIYLYGEGWN FGEVADNALF EQATQGQLGG TGIGTFNDRL RDGVHGGSPV DGSSTYDQGF
1621 GTGLAGDPNG HPAREGTRTL GQQTDLVKLG LAGNLRAFEF EASDGTLKRG DEVDYNGQAA
1681 GYADQPDEVI TYVDAHDNET LFDHGIWKLP TDTSMADRVR MNTLSLATVA FAQTPSFWHA
1741 GTELLRSKSL DRNSYNSGDW FNRIDWTGQE STFGSGLPPE ADNGAKWADM AALLADPALK
1801 PNAADIAAAE ASALDLLRVR SSVDLLQLGS AELIEQKVTF PNSGPDATAG LITMLIDDRI
1861 GGDADADLDG ALVVFNSSPE PITEAIDGLA GREFALNAVQ AEGADAVTAS TSWDAATGTV
1921 TIPARTAAVL VEAQGGEPGE PGEPGEPGEP GQPGEPGEPG QPGEPGEPGA VPTLQLSTGT
1981 VRPGDVIGIT GAGFEPGEAV QVWLHSTPRL LVGATADAQG AISVQATIPL DTEPGDHEIR
2041 VLGVGSGLEA SAALVVLGPL GLTGTEAWLA LLLALALLAA GAIVLGPRLV RRVR
//