LOCUS QEO14031.1 681 aa PRT BCT 10-SEP-2019
DEFINITION Agromyces intestinalis beta-galactosidase protein.
ACCESSION CP043505-1192
PROTEIN_ID QEO14031.1
SOURCE Agromyces intestinalis
ORGANISM Agromyces intestinalis
Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae;
Agromyces.
REFERENCE 1 (bases 1 to 3800200)
AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
TITLE Genome sequencing of strain KACC 19306
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3800200)
AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
TITLE Direct Submission
JOURNAL Submitted (01-SEP-2019) Agricultural Mircrobiology Division,
National Institute of Agricultural Sciences, 166
Nongsaengmyeong-ro, Iseo-myeon, Wanju-gun, Jeollabuk-do 55365,
Korea, Republic of
COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
This genome has a base modification file available.
##Genome-Assembly-Data-START##
Assembly Date :: AUG-2019
Assembly Method :: RS HGAP Assembly v. 3.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 174.0x
Sequencing Technology :: PacBio RSII; Illumina HiSeq
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 09/03/2019 16:08:18
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 4.9
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes (total) :: 3,466
CDSs (total) :: 3,410
Genes (coding) :: 3,349
CDSs (with protein) :: 3,349
Genes (RNA) :: 56
rRNAs :: 2, 2, 2 (5S, 16S, 23S)
complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)
tRNAs :: 47
ncRNAs :: 3
Pseudo Genes (total) :: 61
CDSs (without protein) :: 61
Pseudo Genes (ambiguous residues) :: 0 of 61
Pseudo Genes (frameshifted) :: 7 of 61
Pseudo Genes (incomplete) :: 55 of 61
Pseudo Genes (internal stop) :: 0 of 61
Pseudo Genes (multiple problems) :: 1 of 61
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Agromyces intestinalis"
/mol_type="genomic DNA"
/strain="KACC 19306"
/isolation_source="gut of larva"
/host="Protaetia brevitarsis seulensis"
/culture_collection="KACC:19306"
/type_material="type strain of Agromyces intestinalis"
/db_xref="taxon:2592652"
/country="South Korea: Jeonju"
/collection_date="2017"
/collected_by="Soo-Jin Kim, Soon-Wo Kwon"
/identified_by="Soo-Jin Kim, Jun Heo, Soon-Wo Kwon"
protein /locus_tag="FLP10_06035"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015883560.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
BEGIN
1 MRSQPTWPAI RGIAYGGDYT PEQWSRETWD EDVRLMHEAG VDLVSVGIFA WALIETDEGV
61 FEFSWLDELL DLLHANGIRV DLGTPTASPP AWFFAKHPDA RVITRDGTVM GFGARGMASH
121 SSPAYREAIV RIASALAERY GDHPAVVLWH VHNEYGVPVG EDYSEQSVVA FRGWLRERYG
181 SLDALNTAWG TAFWGQHYTS WQHIGAPTVA PSVVNPAQRL DFARFTDHQL RECFRAERDA
241 IRAHADQPIT TNFMANQAWV ADLWAWGREV DVVSDDHYLW AADPEGEIGL AIAADLSRSV
301 GGGKPWVLME HSTSAVNWQP RNVAKRPGEM ARNSLAHLAR GADAILYFQW RASRSGAEKF
361 HSAMLPHAGT SSRIWREVVD LGSKLDRLDE LQGSVVEANV AMLWDFESFW AQDLEWRPSE
421 DLSYAERVRA YYERLWRDGI TVDFTLPGHD LSKYRLVVAP AQYLLSAADA ANLTRYVEQG
481 GTLVVSYFSA IVDEHDAVHA GGYVAPLGDA LGLTVEEFLP LREGVRTRVA WRGDAQAPLT
541 ADVWHEAISL AGAETIATHL DGPGAGLPAI TRHEFGAGVG WYAGTRLDAE GLRTLMHEVY
601 ADAGVAPAGH PDGLEVVTRR GDAADYVVAI NHRDEPARLE ASGAEPLTGT ELLTGTEVDG
661 AYQVPAGGVA VVRVEREGGG R
//