LOCUS QEO14002.1 565 aa PRT BCT 10-SEP-2019
DEFINITION Agromyces intestinalis malate synthase A protein.
ACCESSION CP043505-1160
PROTEIN_ID QEO14002.1
SOURCE Agromyces intestinalis
ORGANISM Agromyces intestinalis
Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae;
Agromyces.
REFERENCE 1 (bases 1 to 3800200)
AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
TITLE Genome sequencing of strain KACC 19306
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3800200)
AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
TITLE Direct Submission
JOURNAL Submitted (01-SEP-2019) Agricultural Mircrobiology Division,
National Institute of Agricultural Sciences, 166
Nongsaengmyeong-ro, Iseo-myeon, Wanju-gun, Jeollabuk-do 55365,
Korea, Republic of
COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
This genome has a base modification file available.
##Genome-Assembly-Data-START##
Assembly Date :: AUG-2019
Assembly Method :: RS HGAP Assembly v. 3.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 174.0x
Sequencing Technology :: PacBio RSII; Illumina HiSeq
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 09/03/2019 16:08:18
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 4.9
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes (total) :: 3,466
CDSs (total) :: 3,410
Genes (coding) :: 3,349
CDSs (with protein) :: 3,349
Genes (RNA) :: 56
rRNAs :: 2, 2, 2 (5S, 16S, 23S)
complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)
tRNAs :: 47
ncRNAs :: 3
Pseudo Genes (total) :: 61
CDSs (without protein) :: 61
Pseudo Genes (ambiguous residues) :: 0 of 61
Pseudo Genes (frameshifted) :: 7 of 61
Pseudo Genes (incomplete) :: 55 of 61
Pseudo Genes (internal stop) :: 0 of 61
Pseudo Genes (multiple problems) :: 1 of 61
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Agromyces intestinalis"
/mol_type="genomic DNA"
/strain="KACC 19306"
/isolation_source="gut of larva"
/host="Protaetia brevitarsis seulensis"
/culture_collection="KACC:19306"
/type_material="type strain of Agromyces intestinalis"
/db_xref="taxon:2592652"
/country="South Korea: Jeonju"
/collection_date="2017"
/collected_by="Soo-Jin Kim, Soon-Wo Kwon"
/identified_by="Soo-Jin Kim, Jun Heo, Soon-Wo Kwon"
protein /gene="aceB"
/locus_tag="FLP10_05870"
/EC_number="2.3.3.9"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_009772420.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
BEGIN
1 MNTLTIERTD APPQAARRSP RTGAPTTGSF ATVAPRIEVT GAAGERYDEI LTPGALEFLA
61 ELHDRFAHTR HDLLAARLQN RVDAANGRDP KFLPETEQIR RDPSWRVAGP GPGLEDRRVE
121 ITGPTDRKMA INALNSDAKV WLADQEDATS PTWRNVIEGQ LSLFDALRGD LEYTSPEGKQ
181 YRVARDIRET PTIVMRPRGW HLTEKHIRFH DRAGRDMQAS GSLVDFGLYF FHNAKKLIEL
241 GRGPYFYLPK LESHREAKLW NDIFVYAQDR LGIPHGTIRA TVLIETIQAA FEMEEILFEL
301 RDHCAGLNAG RWDYIFSIVK TFRSRGRRWT LPDRKQITMT VPFMRAYTEL LVATCHKRGA
361 HAIGGMSAFI PNRRDSEVTE RALQAVSADK RREASDGFDG TWVAHPDLIA TARAEFDAVL
421 GDRPNQVDRL RDDVSVTAAD LLDIPSAGGQ VTEAGVVDNI SIAIRYLESW LRGVGAAAID
481 NLMEDAATAE ISRSQIWQWL HENTVTAEGV RIDQTFIVGA MGEAVRALPR FDGDRFDDAI
541 QVFRSVALEP EFPTFLTLGA YARFL
//