LOCUS QEO13734.1 1224 aa PRT BCT 10-SEP-2019 DEFINITION Agromyces intestinalis LPXTG cell wall anchor domain-containing protein protein. ACCESSION CP043505-854 PROTEIN_ID QEO13734.1 SOURCE Agromyces intestinalis ORGANISM Agromyces intestinalis Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agromyces. REFERENCE 1 (bases 1 to 3800200) AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W. TITLE Genome sequencing of strain KACC 19306 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3800200) AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W. TITLE Direct Submission JOURNAL Submitted (01-SEP-2019) Agricultural Mircrobiology Division, National Institute of Agricultural Sciences, 166 Nongsaengmyeong-ro, Iseo-myeon, Wanju-gun, Jeollabuk-do 55365, Korea, Republic of COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Date :: AUG-2019 Assembly Method :: RS HGAP Assembly v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 174.0x Sequencing Technology :: PacBio RSII; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 09/03/2019 16:08:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 3,466 CDSs (total) :: 3,410 Genes (coding) :: 3,349 CDSs (with protein) :: 3,349 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 61 CDSs (without protein) :: 61 Pseudo Genes (ambiguous residues) :: 0 of 61 Pseudo Genes (frameshifted) :: 7 of 61 Pseudo Genes (incomplete) :: 55 of 61 Pseudo Genes (internal stop) :: 0 of 61 Pseudo Genes (multiple problems) :: 1 of 61 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Agromyces intestinalis" /mol_type="genomic DNA" /strain="KACC 19306" /isolation_source="gut of larva" /host="Protaetia brevitarsis seulensis" /culture_collection="KACC:19306" /type_material="type strain of Agromyces intestinalis" /db_xref="taxon:2592652" /geo_loc_name="South Korea: Jeonju" /collection_date="2017" /collected_by="Soo-Jin Kim, Soon-Wo Kwon" /identified_by="Soo-Jin Kim, Jun Heo, Soon-Wo Kwon" protein /locus_tag="FLP10_04340" /inference="COORDINATES: protein motif:HMM:PF00331.18,HMM:PF02018.15" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MQRRTIRRAL GLATAAAVAG AGALIGVAPA GAAPTTVNAV DFEDGTTGGW TQSGGGAGLL 61 EVIDGPDGGK VLRVNDRAAD YEGIQSPLGL FEPGKTYDLS MRVRLADGVA GSTGVRFVMK 121 PNYTWIGDTT MSAGAWTTVH DTFAVPADAD PATLQLYIGT ANLAPAAPYS YLVDDIAITT 181 DGAPEGPGTT VLATDFEAGL DGWGLRSGSG STPALVQLAA PGHESDQAAV VTARASQGDG 241 LGHDVTGLLD PAVTYELSAW VRFADGQPVD DVWLSRANTV DGATTYSTLA QFDGISNTGW 301 TQVTARFPGS AADASLLYFE TRYQNGATGN TSDLLVDDIT LVAPGEPTIE DLTPIKDTVD 361 FPVGVAIDSR ETRGAASELV LKHFDRVTPE NFMKPEAWYN ASREFVTTNA ESDALMDFAQ 421 ANDLKVYGHV LVWHSQTPAW FFQDASGQPL AADDAGKAVL RDRLRAHIFD VAGYLAGKYG 481 PFGSETNPLA AIDVVNEVVS DGGEYADGLR RSEWYRILGE DYLDLAFEYA DEAFNDEFAA 541 DGASHPVTLF INDYNTEQGG KQVRYHALVS RLLERGVPVD GVGHQFHVSL AMPVSALAGA 601 IDAFQDLPVT QAVTEFDVTT GTPVTQAKLI DQGYYFRDAF RAFRARTDEL FTVTMWGLTD 661 GRSWRSGSGA PLLFDDALKA KPAYFGVVDG PLPAPLRTAN VFQGDVPLDA AATASPEWAK 721 LPLIAIEGSA RFGVRWEADH LSVFVSVDDA STDASDGVSF TVGDASYAVA RDGSGDVDAV 781 ATERAGGYDL VVHLPLDAAA AGDTLGLDVR VTDAAAGGFG SVAWNAPGEL GTLTLVEPVS 841 YLEVAEAESA PSIDAVVDPV WADANAVTTE KQVQGTDGAI ATVRTLWRGD TLYVLAEVAD 901 PIVDVTGSDP WVQDSVEIYV DPGNAKNGSY RYDDTQIRIS AENAVSFGTG DEAFQRARVT 961 SETAIVDGGY VVEASVLLGD YSGADTVHGL DFQVNDASNG QRTAIRNWAD PTGAGYQSTA 1021 RWGVGRFAAA SSEPGEPGEP GEPGEPGEPD APVVRLSAAS VAAGGQIELD LSGFAPGAEV 1081 TLRLQDPQPA AFATLLAAPV RAISPLAALL AAPVDLATVT TDGSGSAHLV ATIPASTAPG 1141 SYELAALVDD ATLASAPLEV TAADPVADPG DEPSDGTAGS AGAGGSGGGG DLAETGAQFE 1201 PWALAGLVLV ALGALVIVRR RRTA //