LOCUS QEO13519.1 708 aa PRT BCT 10-SEP-2019
DEFINITION Agromyces intestinalis acyltransferase protein.
ACCESSION CP043505-617
PROTEIN_ID QEO13519.1
SOURCE Agromyces intestinalis
ORGANISM Agromyces intestinalis
Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae;
Agromyces.
REFERENCE 1 (bases 1 to 3800200)
AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
TITLE Genome sequencing of strain KACC 19306
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3800200)
AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
TITLE Direct Submission
JOURNAL Submitted (01-SEP-2019) Agricultural Mircrobiology Division,
National Institute of Agricultural Sciences, 166
Nongsaengmyeong-ro, Iseo-myeon, Wanju-gun, Jeollabuk-do 55365,
Korea, Republic of
COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
This genome has a base modification file available.
##Genome-Assembly-Data-START##
Assembly Date :: AUG-2019
Assembly Method :: RS HGAP Assembly v. 3.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 174.0x
Sequencing Technology :: PacBio RSII; Illumina HiSeq
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 09/03/2019 16:08:18
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 4.9
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes (total) :: 3,466
CDSs (total) :: 3,410
Genes (coding) :: 3,349
CDSs (with protein) :: 3,349
Genes (RNA) :: 56
rRNAs :: 2, 2, 2 (5S, 16S, 23S)
complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)
tRNAs :: 47
ncRNAs :: 3
Pseudo Genes (total) :: 61
CDSs (without protein) :: 61
Pseudo Genes (ambiguous residues) :: 0 of 61
Pseudo Genes (frameshifted) :: 7 of 61
Pseudo Genes (incomplete) :: 55 of 61
Pseudo Genes (internal stop) :: 0 of 61
Pseudo Genes (multiple problems) :: 1 of 61
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Agromyces intestinalis"
/mol_type="genomic DNA"
/strain="KACC 19306"
/isolation_source="gut of larva"
/host="Protaetia brevitarsis seulensis"
/culture_collection="KACC:19306"
/type_material="type strain of Agromyces intestinalis"
/db_xref="taxon:2592652"
/country="South Korea: Jeonju"
/collection_date="2017"
/collected_by="Soo-Jin Kim, Soon-Wo Kwon"
/identified_by="Soo-Jin Kim, Jun Heo, Soon-Wo Kwon"
protein /locus_tag="FLP10_03135"
/inference="COORDINATES: protein motif:HMM:PF01757.20"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
BEGIN
1 MSLADAKMFS VSTPDRTRLP MTLLADAPAR PAVPPTARRG DIEGLRAIAA LLVAAFHIWL
61 GRVSGGVDVF FVVSGFLITM TIVRQIDRFG TVRPLVYVGR LARRLLPAAL IVLAVTGVAA
121 LLILSLAARE RTFSEIAAAA GYVENWFLAF SSIDYLARDA FHSPVQHFWA MSAQGQFYLI
181 WLVLGLVVVW IVRRSAIGVR SALIAGISVV LAASFAWSVV STANNQAFAY YDTFARVWEF
241 ALGGLTALVL TRIPLSRRLA SVLGWFGVAA IITCGLLLQV SELFPGWAAL WPAGAAVLVL
301 WAHVQPTRYG ADRFLGLRPL VWLGGLSYGI YLWHWPIFVF ALYLRDGRPL GVLAGMAVIA
361 AAIGLAWLTK RCVERPFTTA ADSEPTRRVA RAGLAVALAV VLIASFGAGM FERNRADAQV
421 AAEQALIANP DACLGAAYRV EPECAGVVPR SPAIPESPPH DRSEAYAPEC SVPPTEYAFR
481 ECSWGPDDAE KRIVLIGNSH AVSWFPAVKA IIESHGWRLD LFFKSACAFN TAERDLAADV
541 RRSCTEWNGK LQEVLAEREP YDYLLTSYFA GEAEFVDAEG NPSDRAGIDG FRAAWEPAVE
601 RGTEVWAVRD IPTMSKTMHE CYQQHLDELE LCGALLRSDA IEEEDLIVAA GAGQDGVKVI
661 DLTEYLCSET ECELTIGGVN VYRDSNHLTA TFAASMAPYL ARAAGIAE
//