LOCUS QEO13336.1 767 aa PRT BCT 10-SEP-2019
DEFINITION Agromyces intestinalis polyribonucleotide nucleotidyltransferase
protein.
ACCESSION CP043505-405
PROTEIN_ID QEO13336.1
SOURCE Agromyces intestinalis
ORGANISM Agromyces intestinalis
Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae;
Agromyces.
REFERENCE 1 (bases 1 to 3800200)
AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
TITLE Genome sequencing of strain KACC 19306
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3800200)
AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
TITLE Direct Submission
JOURNAL Submitted (01-SEP-2019) Agricultural Mircrobiology Division,
National Institute of Agricultural Sciences, 166
Nongsaengmyeong-ro, Iseo-myeon, Wanju-gun, Jeollabuk-do 55365,
Korea, Republic of
COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
This genome has a base modification file available.
##Genome-Assembly-Data-START##
Assembly Date :: AUG-2019
Assembly Method :: RS HGAP Assembly v. 3.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 174.0x
Sequencing Technology :: PacBio RSII; Illumina HiSeq
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 09/03/2019 16:08:18
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 4.9
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes (total) :: 3,466
CDSs (total) :: 3,410
Genes (coding) :: 3,349
CDSs (with protein) :: 3,349
Genes (RNA) :: 56
rRNAs :: 2, 2, 2 (5S, 16S, 23S)
complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)
tRNAs :: 47
ncRNAs :: 3
Pseudo Genes (total) :: 61
CDSs (without protein) :: 61
Pseudo Genes (ambiguous residues) :: 0 of 61
Pseudo Genes (frameshifted) :: 7 of 61
Pseudo Genes (incomplete) :: 55 of 61
Pseudo Genes (internal stop) :: 0 of 61
Pseudo Genes (multiple problems) :: 1 of 61
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Agromyces intestinalis"
/mol_type="genomic DNA"
/strain="KACC 19306"
/isolation_source="gut of larva"
/host="Protaetia brevitarsis seulensis"
/culture_collection="KACC:19306"
/type_material="type strain of Agromyces intestinalis"
/db_xref="taxon:2592652"
/country="South Korea: Jeonju"
/collection_date="2017"
/collected_by="Soo-Jin Kim, Soon-Wo Kwon"
/identified_by="Soo-Jin Kim, Jun Heo, Soon-Wo Kwon"
protein /locus_tag="FLP10_02070"
/EC_number="2.7.7.8"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012038734.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
BEGIN
1 MEGPEITFAE TVIDNGRFGT RTIRFETGRL AQQAQGSAVA YIDEETMLLS ATSVSKQPKE
61 QFDFFPLTID VEERMYAAGR IPGSFFRREG RPSTEAILTC RLIDRPLRPS FVEGLRNEVQ
121 VVVTVLAIEP DELYDVLAIN AASLSTQLSG LPFSGPVAGV RVALIPGEQG SGQWVAFPKH
181 SQLEDAVFSM VVAGRVVTEN DGSQDVAIMM IEAEATDNAW NLIKAGAVKP NEEIIAQGIE
241 ASKPFIKQLV EAQQQVAATA AKPTAEYPTF PPYQPSTYDA VAELAYEELK GVYQIAGKVE
301 RQDADDALKA RVKEAIARKV EAGELPESAL GEVSAAYKSV TKLVVRSRVL EEGVRIDGRG
361 LADIRPLDAE VQVVPRVHGS AIFQRGETQI LGVTTLNMLK LEQQIDSLSP VTKKRYMHNY
421 NFPPYSTGET GRVGSPKRRE IGHGALAERA LVPVLPSRDE FPYAIRQVSE ALGSNGSTSM
481 GSVCASTLSL LNAGVPLRAP VAGIAMGLIS DTVDGETRYA ALTDILGAED ALGDMDFKVA
541 GTSEFVTAIQ LDTKLDGIPA SVLAGALTQA KDARTTILQV LNAAIDGPDE MAPTAPRVIS
601 VQIPVDKIGE LIGPKGKTIN SIQDETGAEI SIEEDGTVYI GATDGPSAEA ARARVNAIAN
661 PTNPEVGEQF LGTVVKIATF GAFVSLLPGK DGLLHISEVR KLAGGKRVEN VEDVLGVGQK
721 ILVEITKIDD RGKLSLAPVV ADPADTEARE ATGEHADAPA EGADVEV
//