LOCUS QEO13322.1 710 aa PRT BCT 10-SEP-2019
DEFINITION Agromyces intestinalis ATP-grasp domain-containing protein protein.
ACCESSION CP043505-389
PROTEIN_ID QEO13322.1
SOURCE Agromyces intestinalis
ORGANISM Agromyces intestinalis
Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae;
Agromyces.
REFERENCE 1 (bases 1 to 3800200)
AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
TITLE Genome sequencing of strain KACC 19306
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3800200)
AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
TITLE Direct Submission
JOURNAL Submitted (01-SEP-2019) Agricultural Mircrobiology Division,
National Institute of Agricultural Sciences, 166
Nongsaengmyeong-ro, Iseo-myeon, Wanju-gun, Jeollabuk-do 55365,
Korea, Republic of
COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
This genome has a base modification file available.
##Genome-Assembly-Data-START##
Assembly Date :: AUG-2019
Assembly Method :: RS HGAP Assembly v. 3.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 174.0x
Sequencing Technology :: PacBio RSII; Illumina HiSeq
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 09/03/2019 16:08:18
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 4.9
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes (total) :: 3,466
CDSs (total) :: 3,410
Genes (coding) :: 3,349
CDSs (with protein) :: 3,349
Genes (RNA) :: 56
rRNAs :: 2, 2, 2 (5S, 16S, 23S)
complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)
tRNAs :: 47
ncRNAs :: 3
Pseudo Genes (total) :: 61
CDSs (without protein) :: 61
Pseudo Genes (ambiguous residues) :: 0 of 61
Pseudo Genes (frameshifted) :: 7 of 61
Pseudo Genes (incomplete) :: 55 of 61
Pseudo Genes (internal stop) :: 0 of 61
Pseudo Genes (multiple problems) :: 1 of 61
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Agromyces intestinalis"
/mol_type="genomic DNA"
/strain="KACC 19306"
/isolation_source="gut of larva"
/host="Protaetia brevitarsis seulensis"
/culture_collection="KACC:19306"
/type_material="type strain of Agromyces intestinalis"
/db_xref="taxon:2592652"
/country="South Korea: Jeonju"
/collection_date="2017"
/collected_by="Soo-Jin Kim, Soon-Wo Kwon"
/identified_by="Soo-Jin Kim, Jun Heo, Soon-Wo Kwon"
protein /locus_tag="FLP10_01990"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_018191478.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
BEGIN
1 MGQFEPTARP FERVLVANRG EIAVRVIRTL RRLGIHAVAV YSDADRDAPH VALADSAVRI
61 GPAPALESYL DPTRIVEAAL ATGAQAVHPG YGFLSEHAGF ARACADAGIV FVGPGVEALE
121 IMGDKVRAKA HVAASGVPIV PGVSDLDLPD PGDRHRDRDR DERLVEAAAR IGYPVLVKPS
181 AGGGGKGMQV ARDAGELRSA VPAARRIAAA AFGDDTLLVE RLIERPRHIE VQVLGDAHGA
241 VVHLGERECS LQRRHQKVVE EAPSPLLDEA TRERIGRAAC DAARSVDYRG AGTVEFLVSD
301 AAPGEFFFIE MNTRLQVEHP VTELVTGVDL VEQQLRVAAG EPLSFAQHDV PLDGHAIEAR
361 VYAESPERGF LPATGEVLAW REPTGDGVRV DAGIRTGSTV TADYDPMLAK VIAHGATRSE
421 ALRRLDGALA DTVLLGVESN TGFLRRLLAD PDVRAGALHT GLIDALVARL AGGADGASTD
481 ASGASLLQAA AEALLERDAE DARGRIDGPA AWRRERGWRV GGRVPTAYLV EPVAGIDGEG
541 PLRIVAPERL ADAASGLEAS RVASEAEAAG ASAAVTAIAP DGTVWVHVAG RTAAVRRVDR
601 ATALAARRAR LGRSGAHDPE LRAPMPGTVT AVLVADGDTV HAGQAVVAVE AMKMEHRITA
661 PVDGVARVAV AVGDRVVRDH PVARIEAHAD HGARSEASAS EPAHEAAIRK
//