LOCUS QEO13302.1 929 aa PRT BCT 10-SEP-2019
DEFINITION Agromyces intestinalis DNA translocase FtsK protein.
ACCESSION CP043505-366
PROTEIN_ID QEO13302.1
SOURCE Agromyces intestinalis
ORGANISM Agromyces intestinalis
Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae;
Agromyces.
REFERENCE 1 (bases 1 to 3800200)
AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
TITLE Genome sequencing of strain KACC 19306
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3800200)
AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
TITLE Direct Submission
JOURNAL Submitted (01-SEP-2019) Agricultural Mircrobiology Division,
National Institute of Agricultural Sciences, 166
Nongsaengmyeong-ro, Iseo-myeon, Wanju-gun, Jeollabuk-do 55365,
Korea, Republic of
COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
This genome has a base modification file available.
##Genome-Assembly-Data-START##
Assembly Date :: AUG-2019
Assembly Method :: RS HGAP Assembly v. 3.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 174.0x
Sequencing Technology :: PacBio RSII; Illumina HiSeq
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 09/03/2019 16:08:18
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 4.9
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes (total) :: 3,466
CDSs (total) :: 3,410
Genes (coding) :: 3,349
CDSs (with protein) :: 3,349
Genes (RNA) :: 56
rRNAs :: 2, 2, 2 (5S, 16S, 23S)
complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)
tRNAs :: 47
ncRNAs :: 3
Pseudo Genes (total) :: 61
CDSs (without protein) :: 61
Pseudo Genes (ambiguous residues) :: 0 of 61
Pseudo Genes (frameshifted) :: 7 of 61
Pseudo Genes (incomplete) :: 55 of 61
Pseudo Genes (internal stop) :: 0 of 61
Pseudo Genes (multiple problems) :: 1 of 61
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Agromyces intestinalis"
/mol_type="genomic DNA"
/strain="KACC 19306"
/isolation_source="gut of larva"
/host="Protaetia brevitarsis seulensis"
/culture_collection="KACC:19306"
/type_material="type strain of Agromyces intestinalis"
/db_xref="taxon:2592652"
/geo_loc_name="South Korea: Jeonju"
/collection_date="2017"
/collected_by="Soo-Jin Kim, Soon-Wo Kwon"
/identified_by="Soo-Jin Kim, Jun Heo, Soon-Wo Kwon"
protein /locus_tag="FLP10_01875"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_018191458.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
BEGIN
1 MATSTRSNGR ASGASGARGS SRSTSKTAPT KKLPAARAPK VATDRPSVLV RAWMGLAHLT
61 GGAARALGPE TLAKEERRDG LPFLIVLMAI AGAVVEWFYI DEPLAVGFDA WTFGGLLGRV
121 AFGLPVVLLL FAIWLFRHPS SVHDNTRIGI GLVLLLVSIA ALCHVFGGQP SPSEGMPVLA
181 RAGGILGWML AQPLILLITP YGATAVIALL VALSLLIMTK TPPNRIGTRF RELYAWLFGA
241 PEPDVAPAPV SRASRRRAER AEQVELDGID DEEAAPHLPW WRRNASNREE DPAFEAAGAE
301 GLTEVFGPGS ADGSFESALE GAQAPADAYG AAVLDELARA EAAVGRFTGE VPTGATELLA
361 DGATDAAPPA PAVEAEPEPD RPYHLPSAAT LAAGAPAKQR SAVNDEVVRQ ITGVLDQFSV
421 DAKVTGFSRG PTVTQYEIEL GPGVKVERVT ALSKNLAYAV ASNEVRILSP IPGKSAIGIE
481 IPNADREIVT LGDVLRSGTA TNAKHPMTIG VGKDVGGGYV VANLAKMPHL LVAGSTGSGK
541 SSFVNSMITS LLMRAKPSEV RMVLIDPKRV ELAPYAGVPH LITPIITNPK KAAEALQWVV
601 KEMDMRYDDL ASFGFRHIDD FNRAVVNDEI VLPAGSERRL KPYPYLLVVV DELADLMMVA
661 PRDVEDSIVR ITQLARASGI HLVLATQRPS VDVVTGLIKA NVPSRLAFAV TSVTDSRVIL
721 DQPGADKLIG QGDALFLPMG ASKPIRVQGA WVSEGEIERV VKHVTRQARP EYRQDVAAVV
781 ERKEIDADIG DDLDLLLAAA ELVVSTQFGS TSMLQRKLRV GFAKAGRLMD LLESREIVGP
841 SEGSKARDVL VTVEQLPGVL ARIRGDEPAG GGAAGGVASA ARPEASVSGE TEPIVDDRYD
901 HDPVARMADG REEVEASSDE DAWGLTGRD
//