LOCUS QDH17973.1 948 aa PRT BCT 02-JUL-2019 DEFINITION Swingsia samuiensis isoleucine--tRNA ligase protein. ACCESSION CP038141-682 PROTEIN_ID QDH17973.1 SOURCE Swingsia samuiensis ORGANISM Swingsia samuiensis Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Swingsia. REFERENCE 1 (bases 1 to 2163214) AUTHORS Chua,K.-O., Chan,K.-G. and See-Too,W.-S. TITLE The complete genome sequence of Swingsia samuiensis NBRC107927(T) JOURNAL Unpublished REFERENCE 2 (bases 1 to 2163214) AUTHORS Chua,K.-O., Chan,K.-G. and See-Too,W.-S. TITLE Direct Submission JOURNAL Submitted (20-MAR-2019) Institute of Biological Sciences, University of Malaya, University of Malaya, Kuala Lumpur, Kuala Lumpur 50603, Malaysia COMMENT Bacteria and source DNA available from NBRC. Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 19-MAR-2019 Assembly Method :: HGAP v. 4 Assembly Name :: Swingsia_samuiensis Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 625.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 03/21/2019 13:37:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.8 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 2,097 CDSs (total) :: 2,019 Genes (coding) :: 1,987 CDSs (with protein) :: 1,987 Genes (RNA) :: 78 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32 Pseudo Genes (frameshifted) :: 16 of 32 Pseudo Genes (incomplete) :: 17 of 32 Pseudo Genes (internal stop) :: 8 of 32 Pseudo Genes (multiple problems) :: 8 of 32 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Swingsia samuiensis" /mol_type="genomic DNA" /strain="AH83" /isolation_source="Plant" /host="Allamanda cathartica" /type_material="type strain of Swingsia samuiensis" /db_xref="taxon:1293412" /geo_loc_name="Thailand: Samui Island" /collection_date="14-Mar-2007" protein /locus_tag="E3D00_03605" /EC_number="6.1.1.5" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_007283113.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MSDKSDMNFK EQQDRYRDTV FLPRTSFPMR GGLPKREPEI LQHWAEMDLD GKIREAGKGR 61 PVFTLHDGPP YANGHIHIGH ALNKVMKDVI NRAHRMSGFE VRYLPGWDCH GLPIEWRIEE 121 QYRKAGKDKD TVPVLQFREE CRQYAAEWVG NQAEGFKRIG IQAEWENRYV TMDFSSEAKI 181 VEEIGRFLLD GSLYRGLRPV MWSPVEKTAL AEAEIEYHDI DSTTLFVAFP AVKDPTPGQA 241 LKGVSAVIWT TTPWTIPANR ALAYGPDITY VVLRVDETTE ESLVPQGARL LIAEDLVETF 301 SKEVGISGSH VLYTLPGKAL EGAVFAHPLR GNGYDYDVPM LPGEFVTTEV GTGLVHMAPA 361 HGQDDFVTCR QHGIEVTELV QGDGRYAPWV PHLEGLHVFK AAEPVSDLLT EARQRAEAAG 421 EPAIGLMGRG KINHSYPHSW RSKAPIIFRA TPQWFIGMDG ATELREASLN ALHDVTFVPE 481 SSRRRLTSMV EQRPDWCISR QRAWGVPIAI FVEKRTGEVL RDADVMQRVV DAFKEKGADA 541 WYNTDPAVFL GPERNPDDYE QVFDIVDVWF ESGASHQFVL GQEGLSFPAD LYLEGSDQHR 601 GWFQSSLLES VGTQGCAPYK AIVTNGFVLD EQGRKMSKSL GNVISPTDVT DKLGADILRL 661 WVLNSDTNED LRIGHEILKQ QGELYRRLRN TLRWLLGALD SYTPEEAVSY EDMPPLEQYI 721 LHRLTELRAL IAEAVETHEW VGVYPALHGF CTTDLSAFYF DIRKDAIYCD APSDMTRRAA 781 RTVLDILQRA LCTWLAPVLV FTAEEAWQAR FGEETSVHLE PFFEPDAAWN KPELGELWED 841 IRAYRRIVTT ELETARREGI IGSSLEADVT LPFSQEEAEK LGGFDWAELL ITSHAEVELL 901 PGETRHGGPT VERAAGHKCA RCWKVLPEVG ENKEHPALCL RCVNVVSA //