LOCUS       QDH17671.1              1509 aa    PRT              BCT 02-JUL-2019
DEFINITION  Swingsia samuiensis chromosome segregation protein SMC protein.
ACCESSION   CP038141-1718
PROTEIN_ID  QDH17671.1
SOURCE      Swingsia samuiensis
  ORGANISM  Swingsia samuiensis
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;
            Acetobacteraceae; Swingsia.
REFERENCE   1  (bases 1 to 2163214)
  AUTHORS   Chua,K.-O., Chan,K.-G. and See-Too,W.-S.
  TITLE     The complete genome sequence of Swingsia samuiensis NBRC107927(T)
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2163214)
  AUTHORS   Chua,K.-O., Chan,K.-G. and See-Too,W.-S.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-MAR-2019) Institute of Biological Sciences,
            University of Malaya, University of Malaya, Kuala Lumpur, Kuala
            Lumpur 50603, Malaysia
COMMENT     Bacteria and source DNA available from NBRC.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-MAR-2019
            Assembly Method        :: HGAP v. 4
            Assembly Name          :: Swingsia_samuiensis
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 625.0x
            Sequencing Technology  :: PacBio Sequel
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/21/2019 13:37:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,097
            CDSs (total)                      :: 2,019
            Genes (coding)                    :: 1,987
            CDSs (with protein)               :: 1,987
            Genes (RNA)                       :: 78
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 32
            CDSs (without protein)            :: 32
            Pseudo Genes (ambiguous residues) :: 0 of 32
            Pseudo Genes (frameshifted)       :: 16 of 32
            Pseudo Genes (incomplete)         :: 17 of 32
            Pseudo Genes (internal stop)      :: 8 of 32
            Pseudo Genes (multiple problems)  :: 8 of 32
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Swingsia samuiensis"
                     /mol_type="genomic DNA"
                     /strain="AH83"
                     /isolation_source="Plant"
                     /host="Allamanda cathartica"
                     /type_material="type strain of Swingsia samuiensis"
                     /db_xref="taxon:1293412"
                     /country="Thailand: Samui Island"
                     /collection_date="14-Mar-2007"
     protein         /locus_tag="E3D00_08925"
                     /inference="COORDINATES: protein
                     motif:HMM:PF02463.17,HMM:PF13175.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MSSQQNATIL GLTITGFKSF ADEVQVNILP GLTGIIGPNG CGKSNVVEAL RWAMGETSAR
       61 SLRGGELDDL IFAGTGARSA RNIAQVMLRL SGTKGLAPSP FQDADELEIS RRIERGAGSE
      121 YRINGRVVRA RDIQTLFADL SSGARSSGIV SQNRVSQLIA AKPEERRLLL EEAAGITGLH
      181 TRRHDAELKL RQTEANLSRA EDLRLQIEER LSSLNTQTSQ ARKYRELSEL LRETENTLHH
      241 LLHAKGKLAV EKSLQDLKSA KEKLQAAEMD AEQAAIAEFE ARQASPHLHE NIEKLRSQLE
      301 HHKIKQETLR ADLFRAQENE KGAQNHLSQI ESDLLQNTQR LTQYRASYDE TQQKLILFQE
      361 QIQELPEQEQ QLAKEAQKLS EEQQSIVKQL DQTTQQRDTE SAALKNIILT IENIQNRIDT
      421 ESQNYHKTAL EISELDKTLP QEDAILEIQH KSEEADLYCS HIQNTFTEHQ KDLQEKLLQS
      481 ELSKRTLEEE TKRFENILRM EKDLQDRLKN IETQLQENHD LFYQNKKNIL DDNAKNELQK
      541 NNNTLKNKLN ELEREEISKS NDLSQTNTEW LEARAQAEEQ IQRYQAIIRS RDTAQRVMNE
      601 AKKKVTLAQE NLERDKKALI PAEELTSIRE TTEKHSQHLS KTQSDIQKTE KDLLALLEGE
      661 KQTQQSVFQI ENAIIRLKTE QESLQISLNA IEKQPNSLED SLNIPPHLVR AVSAVLANGL
      721 NASLADETTP ATQRWRELPN ISFSAEAAFG EPLSNLIEAP PALNRRLQSA FLLADQSLAK
      781 DLQKKLSPGQ ILVCENGALW RWDGFIRSAH AADTGAVRLE QKNRLNDILL QITQHETDLP
      841 DLVVTLQNQS EQREKIEKDL QLYRQKSVEI EHSLNKQRAH MAQLEQRADL AQSRWEESQK
      901 RLEEALQNLQ HAKSDWTSLE EDYTAFENPE KFSQKSQKLS EKVTLQRKEL EATSLALKTC
      961 RKEVENHTRL LDQALLQHQS AQTRDKEISS HITHMTKERN NLQSEISRVS DNQNKPDLEL
     1021 LNTTTLNAQK SYADSEKQLQ ILSQDLLKAQ ENKELLHTNL RQIEQLKTQT NAHISSLLAR
     1081 RKELETLLQN LQKEREHHQN TLSECPDLSL LEQKISHYAS KLEETRSRLK NIENQLSHTA
     1141 IQKTRLAGDI SAQESRIDDL KQQIHDTQSR SDELNSRQNA IKETIQQSQS QILELETHYT
     1201 SFTNALAQTS AEYEEALLKN KAAHSAEQTI QERRRKADAT LSAAQANIAR FSERAEQAKA
     1261 AYIKLQEEIP FPDSASTPLD VSEHNESSIR RQINRLTKER EDLGPVNLRA EIEFQEAKQT
     1321 AETIAKEHDE LTTAIQKLRQ GIHTINGEGR ERLLAVFTEV DRNFQSLFSR MFGGGRAHLG
     1381 MVGSDDPLEA GLEIFAQPPG KKLSTLSLLS GGEQALTALS LIFATFRCNP APICVLDEVD
     1441 APLDDANVER FCSLLSDMTK ETGTHFLVVT HHQLTMAHMN RLYGVTMQER GVSRVLSVDL
     1501 GQATTFVNH
//