LOCUS       QDH17589.1               971 aa    PRT              BCT 02-JUL-2019
DEFINITION  Swingsia samuiensis ATP-dependent DNA helicase protein.
ACCESSION   CP038141-1627
PROTEIN_ID  QDH17589.1
SOURCE      Swingsia samuiensis
  ORGANISM  Swingsia samuiensis
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;
            Acetobacteraceae; Swingsia.
REFERENCE   1  (bases 1 to 2163214)
  AUTHORS   Chua,K.-O., Chan,K.-G. and See-Too,W.-S.
  TITLE     The complete genome sequence of Swingsia samuiensis NBRC107927(T)
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2163214)
  AUTHORS   Chua,K.-O., Chan,K.-G. and See-Too,W.-S.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-MAR-2019) Institute of Biological Sciences,
            University of Malaya, University of Malaya, Kuala Lumpur, Kuala
            Lumpur 50603, Malaysia
COMMENT     Bacteria and source DNA available from NBRC.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-MAR-2019
            Assembly Method        :: HGAP v. 4
            Assembly Name          :: Swingsia_samuiensis
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 625.0x
            Sequencing Technology  :: PacBio Sequel
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/21/2019 13:37:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,097
            CDSs (total)                      :: 2,019
            Genes (coding)                    :: 1,987
            CDSs (with protein)               :: 1,987
            Genes (RNA)                       :: 78
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 32
            CDSs (without protein)            :: 32
            Pseudo Genes (ambiguous residues) :: 0 of 32
            Pseudo Genes (frameshifted)       :: 16 of 32
            Pseudo Genes (incomplete)         :: 17 of 32
            Pseudo Genes (internal stop)      :: 8 of 32
            Pseudo Genes (multiple problems)  :: 8 of 32
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Swingsia samuiensis"
                     /mol_type="genomic DNA"
                     /strain="AH83"
                     /isolation_source="Plant"
                     /host="Allamanda cathartica"
                     /type_material="type strain of Swingsia samuiensis"
                     /db_xref="taxon:1293412"
                     /country="Thailand: Samui Island"
                     /collection_date="14-Mar-2007"
     protein         /locus_tag="E3D00_08460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015072136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MPASPPFLSP FDAPALIARR GLSSILTPDG ELLDLPAPQT RELLRSLPPP LLIHGPAALK
       61 ALDLTPLSQP VPWFDLLDLF LFVRPAQTIA PTPRGLALAL GLHPQKTITA DFLPTLCEAL
      121 LSELNTKKDA PEGNHLRSLL LPLQRSGWVW SDIISDVIGP PSTQGASHSY ESLRIWKRLP
      181 RWEEEAPRPA PSSYPVSPIK ARERLRDILG EHAETRPGQA DFSSVVTSAF EPRETLGAPN
      241 VVLAEAGTGT GKTLGYIAPS TLWAEENKGA VWVSTYTRHL QRQIEQELHR VYPNDTVRRE
      301 KVVVRKGREN YLCLLNMEDM VNTVTSRGKD ATASLLPLSL LARWAEKSRD GDLMGGDLPG
      361 WFGEIFGHGS LAAIADRRGE CIHASCPHYQ TCFVEHGIRR ARRADIVIAN HALVMAQAAW
      421 NSLTPAHLPD EDTIPSRYIF DEGHHIPEAA DSAFSIAFSG LETAELRRWL LGAEGSRSRA
      481 RGLQRRLDDL IERIPSIQKP LHAVLNAARV LPAPGWSARL KEKTSPSPQP APENLPATEE
      541 TETLFPLDLP APPQPENPSE IFLKLLAHQL KARTAEHPSS RSQEYFSNEC DLYPINPPLE
      601 EHSELLAQEL RQLLRPLEQL SQQFEHQIED NDEIDSTLRQ RIESTLRTLH RRAISPVSSW
      661 ISMLDSLQTP PAPDTIPTYI DFIRSEPLPQ KQSPHQSFDI GLYRHWLDPT IPFVSTIQTP
      721 AHGLLITSAT LRDQPQNTSG EETWHAAELR LGATHFIKPP IRASLMSPFD YSKQTRAYII
      781 TDVSSEIASL AHAFRSLFSA SGGSGLGLFT AIRRLREVYK RIQEPLETEG IPLYAQHVDA
      841 MDNATLVDIF RTEIQSCLLG TDAMRDGVDV PGDALRMVVF EKTPWPRPDI LHRERRKLLS
      901 EGRPSEYDDR ITRMRLRQAF GRLIRRSDDR GVFVMLDRRM PSRLLSAFPE GVQVERLSLT
      961 DALEHIKEFL N
//