LOCUS QDH17322.1 782 aa PRT BCT 02-JUL-2019 DEFINITION Swingsia samuiensis PAS domain-containing sensor histidine kinase protein. ACCESSION CP038141-1322 PROTEIN_ID QDH17322.1 SOURCE Swingsia samuiensis ORGANISM Swingsia samuiensis Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Swingsia. REFERENCE 1 (bases 1 to 2163214) AUTHORS Chua,K.-O., Chan,K.-G. and See-Too,W.-S. TITLE The complete genome sequence of Swingsia samuiensis NBRC107927(T) JOURNAL Unpublished REFERENCE 2 (bases 1 to 2163214) AUTHORS Chua,K.-O., Chan,K.-G. and See-Too,W.-S. TITLE Direct Submission JOURNAL Submitted (20-MAR-2019) Institute of Biological Sciences, University of Malaya, University of Malaya, Kuala Lumpur, Kuala Lumpur 50603, Malaysia COMMENT Bacteria and source DNA available from NBRC. Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 19-MAR-2019 Assembly Method :: HGAP v. 4 Assembly Name :: Swingsia_samuiensis Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 625.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 03/21/2019 13:37:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.8 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 2,097 CDSs (total) :: 2,019 Genes (coding) :: 1,987 CDSs (with protein) :: 1,987 Genes (RNA) :: 78 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32 Pseudo Genes (frameshifted) :: 16 of 32 Pseudo Genes (incomplete) :: 17 of 32 Pseudo Genes (internal stop) :: 8 of 32 Pseudo Genes (multiple problems) :: 8 of 32 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Swingsia samuiensis" /mol_type="genomic DNA" /strain="AH83" /isolation_source="Plant" /host="Allamanda cathartica" /type_material="type strain of Swingsia samuiensis" /db_xref="taxon:1293412" /country="Thailand: Samui Island" /collection_date="14-Mar-2007" protein /locus_tag="E3D00_06920" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_007284020.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MRHAWERLCS TRSAVVLTVM ALILAFATFV VLAGGMSIAY RPQVQVIIFF LDSLMVMLIS 61 AVTVGQIGKM LDERRLGFAG ARLHVRLITL FGVVAVLPTI VVGAVAALFF HYGVEIWFSN 121 RVKTALNEAR SVAAGYLQEH NDNIRTEAFA LANTLISIQN DELFTHGTDL FHNPARLQEL 181 LGDEVYERGL TEAEVFDPLT NKVLAVGGLL GSADMNSHPP LPPKSVVEMA RAGDVAILDR 241 PDQRMIRAII SLSGNSGLML IISRPVDPDI VEHMRRTDKL VQDYQYMIDN RGKTQVTVVV 301 IFGLMGLLVL AVGMLTGLSL ANRIANPLGL LILAVTRISQ GDLGVRVPVP AVANNKDDEV 361 TGLSRAFNQM TDQLESQRFE LMRVYDDINE RRRFTETVLS GVSAGVIGLD RQQIIELPNR 421 AASSVLQRDL QPAIGLKLAE RVPEFSDLLE KANQSPDRIH TQEVQVDIHG AEKPGGPGEG 481 GGAGAGRTLL VRIVAEFREA EVQGYVVTFD DITDLQSAQR KAAWADVARR IAHEIKNPLT 541 PIQLAAERLK RRFLKEITSD PEIYVQLVDT IVRQVGDIGR MVDEFSAFAR MPQPIIQAED 601 FSRICREALI LQRNAHPNIL YETLNFPVSG PLVKCDRRLI GQALTNLLQN AADAILMVEQ 661 GKQDECFSGQ ELQPIGHIVM NMYLKEGQAV LEIDDDGVGL PTGERHRLTE PYVTHKAKGT 721 GLGLAIVKKI MEDHGGILLL SDRESQSTNI RRGTRVTLSL PLNDTMIEGE HQDSVKEEEG 781 RA //