LOCUS QDH17183.1 790 aa PRT BCT 02-JUL-2019 DEFINITION Swingsia samuiensis hypothetical protein protein. ACCESSION CP038141-1164 PROTEIN_ID QDH17183.1 SOURCE Swingsia samuiensis ORGANISM Swingsia samuiensis Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Swingsia. REFERENCE 1 (bases 1 to 2163214) AUTHORS Chua,K.-O., Chan,K.-G. and See-Too,W.-S. TITLE The complete genome sequence of Swingsia samuiensis NBRC107927(T) JOURNAL Unpublished REFERENCE 2 (bases 1 to 2163214) AUTHORS Chua,K.-O., Chan,K.-G. and See-Too,W.-S. TITLE Direct Submission JOURNAL Submitted (20-MAR-2019) Institute of Biological Sciences, University of Malaya, University of Malaya, Kuala Lumpur, Kuala Lumpur 50603, Malaysia COMMENT Bacteria and source DNA available from NBRC. Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 19-MAR-2019 Assembly Method :: HGAP v. 4 Assembly Name :: Swingsia_samuiensis Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 625.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 03/21/2019 13:37:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.8 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 2,097 CDSs (total) :: 2,019 Genes (coding) :: 1,987 CDSs (with protein) :: 1,987 Genes (RNA) :: 78 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32 Pseudo Genes (frameshifted) :: 16 of 32 Pseudo Genes (incomplete) :: 17 of 32 Pseudo Genes (internal stop) :: 8 of 32 Pseudo Genes (multiple problems) :: 8 of 32 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Swingsia samuiensis" /mol_type="genomic DNA" /strain="AH83" /isolation_source="Plant" /host="Allamanda cathartica" /type_material="type strain of Swingsia samuiensis" /db_xref="taxon:1293412" /country="Thailand: Samui Island" /collection_date="14-Mar-2007" protein /locus_tag="E3D00_06095" /inference="COORDINATES: ab initio prediction:GeneMarkS-2+" /note="Derived by automated computational analysis using gene prediction method: GeneMarkS-2+." /transl_table=11 BEGIN 1 MNKFLILAAI SYVSFSTSYA ASQIIPNHIQ HPLKAPNNAL MDRIGSSETK TSPTLAPGGL 61 SDKNVISGLP WSANLGDIAT YADNSVQQTD IGTKVAGLDK TGNITAPINT QKLDASSFLR 121 VGTYSGGNSY AGYQPPSPLG SFFTGKAADN SYFDTPGMPG IPTDKALILG GQRPDAKAFE 181 WIFGQPDSTN LGAVVDFVAM NGMSSGQGTG VSAGQFGVML NYMNYDAVVR GTRTGSTPPK 241 FIASGAIKDP DGITHTVTFT PAGATFSPAL PAYWGNLIHD GMNVATNEIG VANEKIPTSN 301 WNMPWEAHKK FRRSFNTYFG TIVAWTKNPD GTIPNITVDG WVVPQQNTYG FGSDWKKVPG 361 RDTLDGSKPA LDTQFTQIKA PAILFGMYTK AFTQYELCDL EPQSKHGDLN NPNGSIGSLV 421 HECDHEVDMW NHDPADYLNS LHGYTLAVNN SGGGKLTKDS YGWTIDGGHA LPLGYHVRNL 481 LSGSVAYQAM GDGSITSSNF YAPYTLGANI GDTSLAQTWG TELGTGGVNT STLRLIQYRD 541 SKPITGENNP AAQQKVSLHL QWRADASKNP ADESGTPGGQ IVYNPPNHEY ALGLGAGGSL 601 QQPHYGLYVD QDGSVSLPNG ATTTNGSSLG FVPQNGDTHG HPYLYAADNN HISLRNTSGT 661 EGGLTVGLLN VDGDSTISRN MTILGESSFE EGGVIGKGQG LAFKYVNWLS GQIPMLEALD 721 ATTLYATTNA GNISSIKAWN VNALGRFKEA LYTPPSSSAS CSAGEFSDDT KYHYVCVSNN 781 HWKRIALSDF //