LOCUS       QDH17183.1               790 aa    PRT              BCT 02-JUL-2019
DEFINITION  Swingsia samuiensis hypothetical protein protein.
ACCESSION   CP038141-1164
PROTEIN_ID  QDH17183.1
SOURCE      Swingsia samuiensis
  ORGANISM  Swingsia samuiensis
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;
            Acetobacteraceae; Swingsia.
REFERENCE   1  (bases 1 to 2163214)
  AUTHORS   Chua,K.-O., Chan,K.-G. and See-Too,W.-S.
  TITLE     The complete genome sequence of Swingsia samuiensis NBRC107927(T)
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2163214)
  AUTHORS   Chua,K.-O., Chan,K.-G. and See-Too,W.-S.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-MAR-2019) Institute of Biological Sciences,
            University of Malaya, University of Malaya, Kuala Lumpur, Kuala
            Lumpur 50603, Malaysia
COMMENT     Bacteria and source DNA available from NBRC.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-MAR-2019
            Assembly Method        :: HGAP v. 4
            Assembly Name          :: Swingsia_samuiensis
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 625.0x
            Sequencing Technology  :: PacBio Sequel
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/21/2019 13:37:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,097
            CDSs (total)                      :: 2,019
            Genes (coding)                    :: 1,987
            CDSs (with protein)               :: 1,987
            Genes (RNA)                       :: 78
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 32
            CDSs (without protein)            :: 32
            Pseudo Genes (ambiguous residues) :: 0 of 32
            Pseudo Genes (frameshifted)       :: 16 of 32
            Pseudo Genes (incomplete)         :: 17 of 32
            Pseudo Genes (internal stop)      :: 8 of 32
            Pseudo Genes (multiple problems)  :: 8 of 32
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Swingsia samuiensis"
                     /mol_type="genomic DNA"
                     /strain="AH83"
                     /isolation_source="Plant"
                     /host="Allamanda cathartica"
                     /type_material="type strain of Swingsia samuiensis"
                     /db_xref="taxon:1293412"
                     /country="Thailand: Samui Island"
                     /collection_date="14-Mar-2007"
     protein         /locus_tag="E3D00_06095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /transl_table=11
BEGIN
        1 MNKFLILAAI SYVSFSTSYA ASQIIPNHIQ HPLKAPNNAL MDRIGSSETK TSPTLAPGGL
       61 SDKNVISGLP WSANLGDIAT YADNSVQQTD IGTKVAGLDK TGNITAPINT QKLDASSFLR
      121 VGTYSGGNSY AGYQPPSPLG SFFTGKAADN SYFDTPGMPG IPTDKALILG GQRPDAKAFE
      181 WIFGQPDSTN LGAVVDFVAM NGMSSGQGTG VSAGQFGVML NYMNYDAVVR GTRTGSTPPK
      241 FIASGAIKDP DGITHTVTFT PAGATFSPAL PAYWGNLIHD GMNVATNEIG VANEKIPTSN
      301 WNMPWEAHKK FRRSFNTYFG TIVAWTKNPD GTIPNITVDG WVVPQQNTYG FGSDWKKVPG
      361 RDTLDGSKPA LDTQFTQIKA PAILFGMYTK AFTQYELCDL EPQSKHGDLN NPNGSIGSLV
      421 HECDHEVDMW NHDPADYLNS LHGYTLAVNN SGGGKLTKDS YGWTIDGGHA LPLGYHVRNL
      481 LSGSVAYQAM GDGSITSSNF YAPYTLGANI GDTSLAQTWG TELGTGGVNT STLRLIQYRD
      541 SKPITGENNP AAQQKVSLHL QWRADASKNP ADESGTPGGQ IVYNPPNHEY ALGLGAGGSL
      601 QQPHYGLYVD QDGSVSLPNG ATTTNGSSLG FVPQNGDTHG HPYLYAADNN HISLRNTSGT
      661 EGGLTVGLLN VDGDSTISRN MTILGESSFE EGGVIGKGQG LAFKYVNWLS GQIPMLEALD
      721 ATTLYATTNA GNISSIKAWN VNALGRFKEA LYTPPSSSAS CSAGEFSDDT KYHYVCVSNN
      781 HWKRIALSDF
//