LOCUS QDH17067.1 363 aa PRT BCT 02-JUL-2019 DEFINITION Swingsia samuiensis HlyD family secretion protein protein. ACCESSION CP038141-1035 PROTEIN_ID QDH17067.1 SOURCE Swingsia samuiensis ORGANISM Swingsia samuiensis Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Swingsia. REFERENCE 1 (bases 1 to 2163214) AUTHORS Chua,K.-O., Chan,K.-G. and See-Too,W.-S. TITLE The complete genome sequence of Swingsia samuiensis NBRC107927(T) JOURNAL Unpublished REFERENCE 2 (bases 1 to 2163214) AUTHORS Chua,K.-O., Chan,K.-G. and See-Too,W.-S. TITLE Direct Submission JOURNAL Submitted (20-MAR-2019) Institute of Biological Sciences, University of Malaya, University of Malaya, Kuala Lumpur, Kuala Lumpur 50603, Malaysia COMMENT Bacteria and source DNA available from NBRC. Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 19-MAR-2019 Assembly Method :: HGAP v. 4 Assembly Name :: Swingsia_samuiensis Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 625.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 03/21/2019 13:37:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.8 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 2,097 CDSs (total) :: 2,019 Genes (coding) :: 1,987 CDSs (with protein) :: 1,987 Genes (RNA) :: 78 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32 Pseudo Genes (frameshifted) :: 16 of 32 Pseudo Genes (incomplete) :: 17 of 32 Pseudo Genes (internal stop) :: 8 of 32 Pseudo Genes (multiple problems) :: 8 of 32 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Swingsia samuiensis" /mol_type="genomic DNA" /strain="AH83" /isolation_source="Plant" /host="Allamanda cathartica" /type_material="type strain of Swingsia samuiensis" /db_xref="taxon:1293412" /country="Thailand: Samui Island" /collection_date="14-Mar-2007" protein /locus_tag="E3D00_05425" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_015073135.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MSQGDHENEQ EQMIDKPKKR RSPVVKVALW LLVILVVLGV ASYIFLTRNE VETDDAYTTG 61 RKVAIAPHVN GYVTQLLVND NQFVHKGDLL VTIDDRDYQA SLDKARADVS QAMANIQAYK 121 LMAEVARKNY PGQLLTAQGN LSAAKAELFR SETDYKRQHL VARAATSQQD IDYARAALDS 181 ARAHVLQAQG QLDQAEPVQA NIGNADTRVS QGDATLKSAQ AELKQAELNM EWTQVRAPND 241 GWISQRNVER GNFVQAGQQM FSIVEPEVWV VANYKETQLA HMRPGQKVDL EIDAYPQLKL 301 KGHIDSLQLG SGESFSTFPP ENATGNFVKT VQRIPVKILI DSGLDPHVPL ALGLSVVPTV 361 YTR //