LOCUS       QDH16747.1              1029 aa    PRT              BCT 02-JUL-2019
DEFINITION  Swingsia samuiensis hypothetical protein protein.
ACCESSION   CP038141-675
PROTEIN_ID  QDH16747.1
SOURCE      Swingsia samuiensis
  ORGANISM  Swingsia samuiensis
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;
            Acetobacteraceae; Swingsia.
REFERENCE   1  (bases 1 to 2163214)
  AUTHORS   Chua,K.-O., Chan,K.-G. and See-Too,W.-S.
  TITLE     The complete genome sequence of Swingsia samuiensis NBRC107927(T)
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2163214)
  AUTHORS   Chua,K.-O., Chan,K.-G. and See-Too,W.-S.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-MAR-2019) Institute of Biological Sciences,
            University of Malaya, University of Malaya, Kuala Lumpur, Kuala
            Lumpur 50603, Malaysia
COMMENT     Bacteria and source DNA available from NBRC.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-MAR-2019
            Assembly Method        :: HGAP v. 4
            Assembly Name          :: Swingsia_samuiensis
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 625.0x
            Sequencing Technology  :: PacBio Sequel
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/21/2019 13:37:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,097
            CDSs (total)                      :: 2,019
            Genes (coding)                    :: 1,987
            CDSs (with protein)               :: 1,987
            Genes (RNA)                       :: 78
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 32
            CDSs (without protein)            :: 32
            Pseudo Genes (ambiguous residues) :: 0 of 32
            Pseudo Genes (frameshifted)       :: 16 of 32
            Pseudo Genes (incomplete)         :: 17 of 32
            Pseudo Genes (internal stop)      :: 8 of 32
            Pseudo Genes (multiple problems)  :: 8 of 32
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Swingsia samuiensis"
                     /mol_type="genomic DNA"
                     /strain="AH83"
                     /isolation_source="Plant"
                     /host="Allamanda cathartica"
                     /type_material="type strain of Swingsia samuiensis"
                     /db_xref="taxon:1293412"
                     /country="Thailand: Samui Island"
                     /collection_date="14-Mar-2007"
     protein         /locus_tag="E3D00_03570"
                     /inference="COORDINATES: protein motif:HMM:PF13403.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MTTTSGLIVS SGQYKGTPPN EKVHSSYRLS SGEDQSDMTI LAGGYVYEDA GVTITNLTLE
       61 AASGSAPAGH LDGDSGKPLP NDAPSSSAAV VTGKVENHGL LGYVWMTGSE TVYPGGSSLN
      121 EWVRNGGKRT VLAGGVINAG SVLNSGVDYI SSGGLVDGAS IRPGGTRNLY TGARQINGVN
      181 VWSGAVLNVY SGADVNGTSS DPISVSSGGL ISGTPDSVLS GVIVNNGTIS STVVNGSGTV
      241 ENVGSTGRTV DQWVTNSAVR NVSSGAVVSN GRIDNNGVDN ILSGGSAISG SVANGGTRNL
      301 QSGAYTENDL VHSAGTVNVS SGATVNSAVV QSGGQILANS AGVLSGVISN DGLISGGLVK
      361 GSETITSNGV HSAGEIASGG NVTVLSGAKF SSGQVDSGGL LTVSSGGLLY QTNISGGTVK
      421 VFGNGPNDNG TTNGLQWVGS SGSAILQNTV WNNGTPMSSI PPVDSTGSGV GLNKDNTITL
      481 NSGATWRHAY INAKGHNVVN SGGTSDDIYM VGGDMVVNSG GKIGSSGATV GSGAVLTVSS
      541 GGTIDGTVQL VSGGSATVDK NAGGIIDMNG DKNTGLVITG LENGGTFTTR VTGFNGTKPE
      601 SSNSGLSQAA GGDSDGIVLA GVKQADVKSV TYPDDNHVQI ALKNGSIINL NVDNAKKQGF
      661 SLVSSHNRSG VQDGTLVYEV CFLAGSMIRT PSGETAVEEM KIGDVVQTLD AVSGTMVSKT
      721 VTWVGHKHAD VDVTASDEDA GYPVRVLKDA LGENVPSQDL LITAEHSLFV EGRFVPVRML
      781 VNGRSIFYDR SFVSYDYYHV ETEEHSVIWA NNAPTESYLD TGNRRSFAQS GQVVDLSAGA
      841 SAKSWASDAA VPLEVSRAFV EPVYHRLMAR AIEAGVAAQT ADRQVTHEHN LHLVTKDGQV
      901 LKAVRHSHDR VVFSLPPQTD GIRLVSRVGR PSVAVGPFVD DRRDLGVLIG EMVVLNAQSR
      961 HEVGAHLEQA DLSGWDVQES SPCRWTQGNA YVPVKTGKDF SLFSVQVLAA GPYVLEEDAS
     1021 VSSVASISA
//