LOCUS QDH16747.1 1029 aa PRT BCT 02-JUL-2019 DEFINITION Swingsia samuiensis hypothetical protein protein. ACCESSION CP038141-675 PROTEIN_ID QDH16747.1 SOURCE Swingsia samuiensis ORGANISM Swingsia samuiensis Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Swingsia. REFERENCE 1 (bases 1 to 2163214) AUTHORS Chua,K.-O., Chan,K.-G. and See-Too,W.-S. TITLE The complete genome sequence of Swingsia samuiensis NBRC107927(T) JOURNAL Unpublished REFERENCE 2 (bases 1 to 2163214) AUTHORS Chua,K.-O., Chan,K.-G. and See-Too,W.-S. TITLE Direct Submission JOURNAL Submitted (20-MAR-2019) Institute of Biological Sciences, University of Malaya, University of Malaya, Kuala Lumpur, Kuala Lumpur 50603, Malaysia COMMENT Bacteria and source DNA available from NBRC. Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 19-MAR-2019 Assembly Method :: HGAP v. 4 Assembly Name :: Swingsia_samuiensis Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 625.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 03/21/2019 13:37:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.8 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 2,097 CDSs (total) :: 2,019 Genes (coding) :: 1,987 CDSs (with protein) :: 1,987 Genes (RNA) :: 78 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32 Pseudo Genes (frameshifted) :: 16 of 32 Pseudo Genes (incomplete) :: 17 of 32 Pseudo Genes (internal stop) :: 8 of 32 Pseudo Genes (multiple problems) :: 8 of 32 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Swingsia samuiensis" /mol_type="genomic DNA" /strain="AH83" /isolation_source="Plant" /host="Allamanda cathartica" /type_material="type strain of Swingsia samuiensis" /db_xref="taxon:1293412" /country="Thailand: Samui Island" /collection_date="14-Mar-2007" protein /locus_tag="E3D00_03570" /inference="COORDINATES: protein motif:HMM:PF13403.4" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MTTTSGLIVS SGQYKGTPPN EKVHSSYRLS SGEDQSDMTI LAGGYVYEDA GVTITNLTLE 61 AASGSAPAGH LDGDSGKPLP NDAPSSSAAV VTGKVENHGL LGYVWMTGSE TVYPGGSSLN 121 EWVRNGGKRT VLAGGVINAG SVLNSGVDYI SSGGLVDGAS IRPGGTRNLY TGARQINGVN 181 VWSGAVLNVY SGADVNGTSS DPISVSSGGL ISGTPDSVLS GVIVNNGTIS STVVNGSGTV 241 ENVGSTGRTV DQWVTNSAVR NVSSGAVVSN GRIDNNGVDN ILSGGSAISG SVANGGTRNL 301 QSGAYTENDL VHSAGTVNVS SGATVNSAVV QSGGQILANS AGVLSGVISN DGLISGGLVK 361 GSETITSNGV HSAGEIASGG NVTVLSGAKF SSGQVDSGGL LTVSSGGLLY QTNISGGTVK 421 VFGNGPNDNG TTNGLQWVGS SGSAILQNTV WNNGTPMSSI PPVDSTGSGV GLNKDNTITL 481 NSGATWRHAY INAKGHNVVN SGGTSDDIYM VGGDMVVNSG GKIGSSGATV GSGAVLTVSS 541 GGTIDGTVQL VSGGSATVDK NAGGIIDMNG DKNTGLVITG LENGGTFTTR VTGFNGTKPE 601 SSNSGLSQAA GGDSDGIVLA GVKQADVKSV TYPDDNHVQI ALKNGSIINL NVDNAKKQGF 661 SLVSSHNRSG VQDGTLVYEV CFLAGSMIRT PSGETAVEEM KIGDVVQTLD AVSGTMVSKT 721 VTWVGHKHAD VDVTASDEDA GYPVRVLKDA LGENVPSQDL LITAEHSLFV EGRFVPVRML 781 VNGRSIFYDR SFVSYDYYHV ETEEHSVIWA NNAPTESYLD TGNRRSFAQS GQVVDLSAGA 841 SAKSWASDAA VPLEVSRAFV EPVYHRLMAR AIEAGVAAQT ADRQVTHEHN LHLVTKDGQV 901 LKAVRHSHDR VVFSLPPQTD GIRLVSRVGR PSVAVGPFVD DRRDLGVLIG EMVVLNAQSR 961 HEVGAHLEQA DLSGWDVQES SPCRWTQGNA YVPVKTGKDF SLFSVQVLAA GPYVLEEDAS 1021 VSSVASISA //