LOCUS       QDH16642.1               923 aa    PRT              BCT 02-JUL-2019
DEFINITION  Swingsia samuiensis hypothetical protein protein.
ACCESSION   CP038141-556
PROTEIN_ID  QDH16642.1
SOURCE      Swingsia samuiensis
  ORGANISM  Swingsia samuiensis
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;
            Acetobacteraceae; Swingsia.
REFERENCE   1  (bases 1 to 2163214)
  AUTHORS   Chua,K.-O., Chan,K.-G. and See-Too,W.-S.
  TITLE     The complete genome sequence of Swingsia samuiensis NBRC107927(T)
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2163214)
  AUTHORS   Chua,K.-O., Chan,K.-G. and See-Too,W.-S.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-MAR-2019) Institute of Biological Sciences,
            University of Malaya, University of Malaya, Kuala Lumpur, Kuala
            Lumpur 50603, Malaysia
COMMENT     Bacteria and source DNA available from NBRC.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-MAR-2019
            Assembly Method        :: HGAP v. 4
            Assembly Name          :: Swingsia_samuiensis
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 625.0x
            Sequencing Technology  :: PacBio Sequel
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/21/2019 13:37:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,097
            CDSs (total)                      :: 2,019
            Genes (coding)                    :: 1,987
            CDSs (with protein)               :: 1,987
            Genes (RNA)                       :: 78
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 32
            CDSs (without protein)            :: 32
            Pseudo Genes (ambiguous residues) :: 0 of 32
            Pseudo Genes (frameshifted)       :: 16 of 32
            Pseudo Genes (incomplete)         :: 17 of 32
            Pseudo Genes (internal stop)      :: 8 of 32
            Pseudo Genes (multiple problems)  :: 8 of 32
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Swingsia samuiensis"
                     /mol_type="genomic DNA"
                     /strain="AH83"
                     /isolation_source="Plant"
                     /host="Allamanda cathartica"
                     /type_material="type strain of Swingsia samuiensis"
                     /db_xref="taxon:1293412"
                     /geo_loc_name="Thailand: Samui Island"
                     /collection_date="14-Mar-2007"
     protein         /locus_tag="E3D00_02930"
                     /inference="COORDINATES: protein motif:HMM:PF13403.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MTKTILPGPY VLQEGQTGGP YIYYYPYQNI TKVSVTASIP KPNDPGFDFW ALQVDFGNYY
       61 WSNPYVHGGL QVKDSPDPYR INWGGVVATD TNANGYTQNN PFDIDKLQNA SPKQYLEADQ
      121 LKDLKFNYNS PITYTVERAG LVTFLPGYYT TIYGRAPYYV NHIRRMWRWT FTVSSTDGSF
      181 GPIKQEVYVN ASNIRSSVFW DENLKPNPDY VKSEWTNYTY ESDTDSNANN IVSSSTINPD
      241 SFFAEVKSYG GQVISGQSIS SGSTEIGSSG YIVNNDVSSA NITVLSGGTV EDNRFSQGAN
      301 VVVSGGGNAV SDKINGGTVT VLSKGQATWE HISSGGVVNI NDGGRGNALT VSSGGVLNLA
      361 YNAIVDSATV IKGGVFKADP YAYIRGTYVN FGRISGGVLN GQETIYSGGR HDGAWIRGVS
      421 KDFPSEILVQ KGGIISSVWV DRYGVLTVQG GGIIEGVATL ALGGSAVIGP SAGGQINLYS
      481 SDSNNLTISG LTSGGVVTTQ IKGFIRSGDQ SQDKIELLGV KPSDVRSVSY PTADQVQLLL
      541 KSGRSIVMNI DGVRSVGYRL ADSPQNGLLY ETCFVRGSKI RLGSGEKAVE SIEIGDEVVT
      601 LCPESQTYRT VPVIWVGRKR MVVDASRPED QVGYPVRIVK DALGAGLPRE DLVVTPEHCL
      661 YLNGGFVPAR MLVNHRSIFY DRTLTDYDYF HIETAEHSIL MANDVLTESY LDTGNRSTFE
      721 EQGNVVSLRS GVGSWEQDAA APLLVEREAV EPLYREFEAR AHVLGCVDHR GDDESLTTDP
      781 DLRLLTNDGT ILSRKRSLNG RELFLIPQGT QSVQILSRTS RPSEVIGPFV DDRRELGVLI
      841 GAMDFFHATG TDRITGHHTA ADLWGWAELE SASYRWTQGA AMLPITPEDL KQGGLLSIQV
      901 IAAGPYVLEK SDTRDSLGYT IAI
//