LOCUS QDH16642.1 923 aa PRT BCT 02-JUL-2019 DEFINITION Swingsia samuiensis hypothetical protein protein. ACCESSION CP038141-556 PROTEIN_ID QDH16642.1 SOURCE Swingsia samuiensis ORGANISM Swingsia samuiensis Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Swingsia. REFERENCE 1 (bases 1 to 2163214) AUTHORS Chua,K.-O., Chan,K.-G. and See-Too,W.-S. TITLE The complete genome sequence of Swingsia samuiensis NBRC107927(T) JOURNAL Unpublished REFERENCE 2 (bases 1 to 2163214) AUTHORS Chua,K.-O., Chan,K.-G. and See-Too,W.-S. TITLE Direct Submission JOURNAL Submitted (20-MAR-2019) Institute of Biological Sciences, University of Malaya, University of Malaya, Kuala Lumpur, Kuala Lumpur 50603, Malaysia COMMENT Bacteria and source DNA available from NBRC. Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 19-MAR-2019 Assembly Method :: HGAP v. 4 Assembly Name :: Swingsia_samuiensis Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 625.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 03/21/2019 13:37:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.8 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 2,097 CDSs (total) :: 2,019 Genes (coding) :: 1,987 CDSs (with protein) :: 1,987 Genes (RNA) :: 78 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32 Pseudo Genes (frameshifted) :: 16 of 32 Pseudo Genes (incomplete) :: 17 of 32 Pseudo Genes (internal stop) :: 8 of 32 Pseudo Genes (multiple problems) :: 8 of 32 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Swingsia samuiensis" /mol_type="genomic DNA" /strain="AH83" /isolation_source="Plant" /host="Allamanda cathartica" /type_material="type strain of Swingsia samuiensis" /db_xref="taxon:1293412" /geo_loc_name="Thailand: Samui Island" /collection_date="14-Mar-2007" protein /locus_tag="E3D00_02930" /inference="COORDINATES: protein motif:HMM:PF13403.4" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MTKTILPGPY VLQEGQTGGP YIYYYPYQNI TKVSVTASIP KPNDPGFDFW ALQVDFGNYY 61 WSNPYVHGGL QVKDSPDPYR INWGGVVATD TNANGYTQNN PFDIDKLQNA SPKQYLEADQ 121 LKDLKFNYNS PITYTVERAG LVTFLPGYYT TIYGRAPYYV NHIRRMWRWT FTVSSTDGSF 181 GPIKQEVYVN ASNIRSSVFW DENLKPNPDY VKSEWTNYTY ESDTDSNANN IVSSSTINPD 241 SFFAEVKSYG GQVISGQSIS SGSTEIGSSG YIVNNDVSSA NITVLSGGTV EDNRFSQGAN 301 VVVSGGGNAV SDKINGGTVT VLSKGQATWE HISSGGVVNI NDGGRGNALT VSSGGVLNLA 361 YNAIVDSATV IKGGVFKADP YAYIRGTYVN FGRISGGVLN GQETIYSGGR HDGAWIRGVS 421 KDFPSEILVQ KGGIISSVWV DRYGVLTVQG GGIIEGVATL ALGGSAVIGP SAGGQINLYS 481 SDSNNLTISG LTSGGVVTTQ IKGFIRSGDQ SQDKIELLGV KPSDVRSVSY PTADQVQLLL 541 KSGRSIVMNI DGVRSVGYRL ADSPQNGLLY ETCFVRGSKI RLGSGEKAVE SIEIGDEVVT 601 LCPESQTYRT VPVIWVGRKR MVVDASRPED QVGYPVRIVK DALGAGLPRE DLVVTPEHCL 661 YLNGGFVPAR MLVNHRSIFY DRTLTDYDYF HIETAEHSIL MANDVLTESY LDTGNRSTFE 721 EQGNVVSLRS GVGSWEQDAA APLLVEREAV EPLYREFEAR AHVLGCVDHR GDDESLTTDP 781 DLRLLTNDGT ILSRKRSLNG RELFLIPQGT QSVQILSRTS RPSEVIGPFV DDRRELGVLI 841 GAMDFFHATG TDRITGHHTA ADLWGWAELE SASYRWTQGA AMLPITPEDL KQGGLLSIQV 901 IAAGPYVLEK SDTRDSLGYT IAI //