LOCUS QDH16634.1 772 aa PRT BCT 02-JUL-2019 DEFINITION Swingsia samuiensis ATP-dependent Clp protease ATP-binding subunit ClpA protein. ACCESSION CP038141-548 PROTEIN_ID QDH16634.1 SOURCE Swingsia samuiensis ORGANISM Swingsia samuiensis Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Swingsia. REFERENCE 1 (bases 1 to 2163214) AUTHORS Chua,K.-O., Chan,K.-G. and See-Too,W.-S. TITLE The complete genome sequence of Swingsia samuiensis NBRC107927(T) JOURNAL Unpublished REFERENCE 2 (bases 1 to 2163214) AUTHORS Chua,K.-O., Chan,K.-G. and See-Too,W.-S. TITLE Direct Submission JOURNAL Submitted (20-MAR-2019) Institute of Biological Sciences, University of Malaya, University of Malaya, Kuala Lumpur, Kuala Lumpur 50603, Malaysia COMMENT Bacteria and source DNA available from NBRC. Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 19-MAR-2019 Assembly Method :: HGAP v. 4 Assembly Name :: Swingsia_samuiensis Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 625.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 03/21/2019 13:37:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.8 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 2,097 CDSs (total) :: 2,019 Genes (coding) :: 1,987 CDSs (with protein) :: 1,987 Genes (RNA) :: 78 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32 Pseudo Genes (frameshifted) :: 16 of 32 Pseudo Genes (incomplete) :: 17 of 32 Pseudo Genes (internal stop) :: 8 of 32 Pseudo Genes (multiple problems) :: 8 of 32 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Swingsia samuiensis" /mol_type="genomic DNA" /strain="AH83" /isolation_source="Plant" /host="Allamanda cathartica" /type_material="type strain of Swingsia samuiensis" /db_xref="taxon:1293412" /country="Thailand: Samui Island" /collection_date="14-Mar-2007" protein /gene="clpA" /locus_tag="E3D00_02890" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_007283213.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MLSRTLEQTL HRALTFAADR HHEYATLEHL LLALTEDADT LTVFRACGID LDKLQSDLTE 61 FLDKDLAGLA SDRPTEPKPT AAFQRVIQRA AIHVQSTGRD EVTGANVLVA LFAERESHAV 121 YFLQLQDMTR LDAVNFISHG IAKAPDRGAA RKASTASSSE TPDHEEPSKE PPKDGALASY 181 CVNLNERARE GRIDPLIGRQ HEIERTIQIL CRRTKNNPLY VGDPGVGKTA IAEGLAKRII 241 DKDVPEVLQE STIFSLDMGS LLAGTRYRGD FEERLKAVVA ELEQTPGSIL FVDEIHTIIG 301 AGSTSGGSMD ASNLLKPALA AGTLHCIGST TYKEFRQHFE KDRALVRRFQ KIDVPEPSVE 361 DAIKILRGLK GSYEKHHKVR YTDEAIRGAV ELAAKYVHDR KLPDKAIDVI DEVGAARMLL 421 PESKRRKTVT LKDVEDAISK IARIPPKSVS ADDRETLRHL ERDLRNMVFG QDKAIEALAA 481 AIKLSRAGLR EAEKPIGNYL FSGPTGVGKT EVARQLASSL GIELIRFDMS EYMERHSISR 541 LIGAPPGYVG FDQGGLLTDA IDQHPHAVLL LDEIEKAHPD LYNVLLQVMD HGRLTDHNGK 601 VVDFRNVILI MTTNAGAADL SKEAIGFARS DREGEDEDAI KRAFTPEFRN RLDAIIPFAN 661 LTPDIVGRVV EKFILQLEAQ LADRHVIIEI SSAAKEWLAE KGYDRLYGAR PLGRVIQEHI 721 KKPLAEELLF GRLAKGGAVK IGLKNKALDF KIIEGTSPSD NNSTKKKNVA TS //