LOCUS       QDH16586.1               852 aa    PRT              BCT 02-JUL-2019
DEFINITION  Swingsia samuiensis hypothetical protein protein.
ACCESSION   CP038141-495
PROTEIN_ID  QDH16586.1
SOURCE      Swingsia samuiensis
  ORGANISM  Swingsia samuiensis
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;
            Acetobacteraceae; Swingsia.
REFERENCE   1  (bases 1 to 2163214)
  AUTHORS   Chua,K.-O., Chan,K.-G. and See-Too,W.-S.
  TITLE     The complete genome sequence of Swingsia samuiensis NBRC107927(T)
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2163214)
  AUTHORS   Chua,K.-O., Chan,K.-G. and See-Too,W.-S.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-MAR-2019) Institute of Biological Sciences,
            University of Malaya, University of Malaya, Kuala Lumpur, Kuala
            Lumpur 50603, Malaysia
COMMENT     Bacteria and source DNA available from NBRC.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-MAR-2019
            Assembly Method        :: HGAP v. 4
            Assembly Name          :: Swingsia_samuiensis
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 625.0x
            Sequencing Technology  :: PacBio Sequel
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/21/2019 13:37:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,097
            CDSs (total)                      :: 2,019
            Genes (coding)                    :: 1,987
            CDSs (with protein)               :: 1,987
            Genes (RNA)                       :: 78
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 32
            CDSs (without protein)            :: 32
            Pseudo Genes (ambiguous residues) :: 0 of 32
            Pseudo Genes (frameshifted)       :: 16 of 32
            Pseudo Genes (incomplete)         :: 17 of 32
            Pseudo Genes (internal stop)      :: 8 of 32
            Pseudo Genes (multiple problems)  :: 8 of 32
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Swingsia samuiensis"
                     /mol_type="genomic DNA"
                     /strain="AH83"
                     /isolation_source="Plant"
                     /host="Allamanda cathartica"
                     /type_material="type strain of Swingsia samuiensis"
                     /db_xref="taxon:1293412"
                     /country="Thailand: Samui Island"
                     /collection_date="14-Mar-2007"
     protein         /locus_tag="E3D00_02615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /transl_table=11
BEGIN
        1 MKFLKNYYFI IIILPIVIYF PELIGLTSSD PMMTSSTVIV NPPPFTHGGL LPGNPGWIDG
       61 CAGVFVEALG RLVTLDWLHG IIPWWNPYSG VGMPFAGEYQ PAAFFLPFVL FLALPNGLLM
      121 MKCTLQIIAG LSTYAFLKKI PLAPKAAFIG ALLYMFNGTY AWASDGPSEP LAFLPLALYG
      181 VECAREGRWG WLTIGLSYLM LSGFPETAYL LGLLVLGWAV VRFFQSGKDR LKYTTNIILA
      241 GLVAALIAAP QLLAFMSYLP YADVGSHASV NDTPLPTEAW SMLFFPYING PFFYGNQFNS
      301 WYALGGYLGV INPLIALISL SIRKYTSLRW FLFLFAISII GKQANLPIIT WVIDHIPEAA
      361 HTVFYRLSEP VVEACFIFLV SFAIDDLIQK RLSPRKYIYL CFSLVSVILG WVIFLDLPMI
      421 KKLHSFSYGP ITSHQYFIAS VIMTSFEMLL LLFLYLKKSS PQKIGIFAFL CNLIFFAFPL
      481 LSARPEHPLD QPFLDSLRTE TKNFQRFVTL GPIEPNYGVY LGIPSINFNA IPTPRNWIAR
      541 IKKDFGNRLD PVTFDGDFPR DENGSPFLQK AVLFQPHLFE DLAVSALVTA HNSLGLSPYP
      601 LKGRELKGYA LTPDKPTLRV NIKTWNNFSA QKIMLKLGTY FHQSDGTLTL AFCSHEQCAS
      661 GKIDLKLATD NEFTPVVLDR SIPDAATSLT FSLIHAHSPV MIWGSSQGDE IWPILHVEPL
      721 EVSKELIFVK SGAIGDLYRF RHPAPYFEAD PSCLLTPISR EEITTSCTQP SHLIRRELMM
      781 PGWSATINNR NVSINSKDDL FEEINIPQGK SHIKFYFKPK YANWSFISFF LGLLVLFFHF
      841 ARNYLRKKRS IL
//