LOCUS       QDH16444.1               914 aa    PRT              BCT 02-JUL-2019
DEFINITION  Swingsia samuiensis DUF4159 domain-containing protein protein.
ACCESSION   CP038141-339
PROTEIN_ID  QDH16444.1
SOURCE      Swingsia samuiensis
  ORGANISM  Swingsia samuiensis
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;
            Acetobacteraceae; Swingsia.
REFERENCE   1  (bases 1 to 2163214)
  AUTHORS   Chua,K.-O., Chan,K.-G. and See-Too,W.-S.
  TITLE     The complete genome sequence of Swingsia samuiensis NBRC107927(T)
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2163214)
  AUTHORS   Chua,K.-O., Chan,K.-G. and See-Too,W.-S.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-MAR-2019) Institute of Biological Sciences,
            University of Malaya, University of Malaya, Kuala Lumpur, Kuala
            Lumpur 50603, Malaysia
COMMENT     Bacteria and source DNA available from NBRC.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-MAR-2019
            Assembly Method        :: HGAP v. 4
            Assembly Name          :: Swingsia_samuiensis
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 625.0x
            Sequencing Technology  :: PacBio Sequel
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/21/2019 13:37:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,097
            CDSs (total)                      :: 2,019
            Genes (coding)                    :: 1,987
            CDSs (with protein)               :: 1,987
            Genes (RNA)                       :: 78
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 32
            CDSs (without protein)            :: 32
            Pseudo Genes (ambiguous residues) :: 0 of 32
            Pseudo Genes (frameshifted)       :: 16 of 32
            Pseudo Genes (incomplete)         :: 17 of 32
            Pseudo Genes (internal stop)      :: 8 of 32
            Pseudo Genes (multiple problems)  :: 8 of 32
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Swingsia samuiensis"
                     /mol_type="genomic DNA"
                     /strain="AH83"
                     /isolation_source="Plant"
                     /host="Allamanda cathartica"
                     /type_material="type strain of Swingsia samuiensis"
                     /db_xref="taxon:1293412"
                     /geo_loc_name="Thailand: Samui Island"
                     /collection_date="14-Mar-2007"
     protein         /locus_tag="E3D00_01815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007282764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MILLSPFVLL GLIALPAIWW LIRATPPAPR ETTFPSLILL ERLKLTREDA THAPLWLLLL
       61 RILAVALIIF GLARPILLPT QAYTHRHSLT LIIDNGWASI PHWNDRVAAA QVLGQASLRH
      121 GHPVTILLAA RTADGSLPEP FTTQDDRAFS NYLSHIQPEP WPVDRSAVTK VVTQYNLASQ
      181 DIIILSDGVA SSSDEQLQNA LKKSSSVEDM RWKGCGPFVL HITPDKDGAF TAKTETLSPC
      241 ADTSFSLRAM TSEGNTLASF PLKIGKSFSV SLPVLARNQL DHFSLEGMKG PATTFLLGDA
      301 NHRKPVGVLQ TPGDTTPLLG SAFYLKQALD TQAELRTGDA NTLLSSPLSV IIATDGALSG
      361 DQTKSKILAW VRHGGMLIRF AGPDLAAPSE NQNQTGGTSQ SDPLIPVPLM NGMRQLGGPM
      421 SWGKPQALAS FPASSPFAEL TIPAEVNISR QVLAKPDNDL SQHVWASLQD GTPLVTARAE
      481 GNGEIVLFHV TSAPDWSNLP LSGLFPDMLE RLINRSAGIN GKTPSSLMPW RILSVDGELT
      541 PPSPAATSIH AKDFKTTDIN VFHPVGLYGP ARATHALNLA DHIPTLHTEP LLGTAISPDG
      601 AQPERPLGPS LIFAGLILLL VDLTLSLKRR GIVPFAIMLL ICGFPYQAYA QSNAPSASLD
      661 TQIPQAALET RLAYIITGHD DIDAASRAGL EGLSNYTSAR SSASLGHPDG VIPGKDDLAF
      721 YPLLYWPITA DAQPDPARIK ALNAFMEHGG ILLIDEQGAG TEVNPSSMTA IRTALQRVTD
      781 GLTIPPLTTL NDKNVLSHTF YLLHNNFSGR ISGEPVYIAR EGDEANDDVS PVIIGNADWA
      841 HAWATDTSGN HPYAVIPGGE DQRTLAYRFG MNVVLYALTG NYKADQAHYP EMLHRLGQNS
      901 PNDPSSQGAE GNAP
//