LOCUS       QDH16430.1              1084 aa    PRT              BCT 02-JUL-2019
DEFINITION  Swingsia samuiensis carbamoyl-phosphate synthase large
            subunit protein.
ACCESSION   CP038141-323
PROTEIN_ID  QDH16430.1
SOURCE      Swingsia samuiensis
  ORGANISM  Swingsia samuiensis
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;
            Acetobacteraceae; Swingsia.
REFERENCE   1  (bases 1 to 2163214)
  AUTHORS   Chua,K.-O., Chan,K.-G. and See-Too,W.-S.
  TITLE     The complete genome sequence of Swingsia samuiensis NBRC107927(T)
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2163214)
  AUTHORS   Chua,K.-O., Chan,K.-G. and See-Too,W.-S.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-MAR-2019) Institute of Biological Sciences,
            University of Malaya, University of Malaya, Kuala Lumpur, Kuala
            Lumpur 50603, Malaysia
COMMENT     Bacteria and source DNA available from NBRC.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-MAR-2019
            Assembly Method        :: HGAP v. 4
            Assembly Name          :: Swingsia_samuiensis
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 625.0x
            Sequencing Technology  :: PacBio Sequel
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/21/2019 13:37:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,097
            CDSs (total)                      :: 2,019
            Genes (coding)                    :: 1,987
            CDSs (with protein)               :: 1,987
            Genes (RNA)                       :: 78
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 32
            CDSs (without protein)            :: 32
            Pseudo Genes (ambiguous residues) :: 0 of 32
            Pseudo Genes (frameshifted)       :: 16 of 32
            Pseudo Genes (incomplete)         :: 17 of 32
            Pseudo Genes (internal stop)      :: 8 of 32
            Pseudo Genes (multiple problems)  :: 8 of 32
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Swingsia samuiensis"
                     /mol_type="genomic DNA"
                     /strain="AH83"
                     /isolation_source="Plant"
                     /host="Allamanda cathartica"
                     /type_material="type strain of Swingsia samuiensis"
                     /db_xref="taxon:1293412"
                     /country="Thailand: Samui Island"
                     /collection_date="14-Mar-2007"
     protein         /gene="carB"
                     /locus_tag="E3D00_01735"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008852350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MPKRTDIKSI LIIGAGPIVI GQASEFDYSG AQACKALKEE GYRVILINSN PATIMTDPGL
       61 ADATYIEPIT PEFVEHIILR EKPDAVLPTM GGQTALNAAM ALDKSGFLKK HNVELIGADA
      121 EVIDRAEDRQ KFREAMDEIG IESPKSTIAH TLEEARAALE DVGLPAIIRP SFTMGGAGGG
      181 IAYNREEFDQ IVAGGLDASP TTEVLIEESV LGWKEYEMEV VRDKADNCII ICSIENIDPM
      241 GVHTGDSITV APALTLTDKE YQRMRDASIA CLRKIGVETG GSNVQFGVNP ENGRMVVIEM
      301 NPRVSRSSAL ASKATGFPIA KIAAKLAVGY TLDELKNDIT RTTPASFEPT IDYVVAKIPR
      361 FTFEKFPGSP ALLSTSMKSV GEAMSVGRSF AEAIQKGLRS METGLTGLDP VEAPGDGSKD
      421 AYLAALAEPR PERILMAAQA LRAGLSVEEI HEACKFEPWF LRQLEDIIAS EREIEKNGLP
      481 QDAYNLRRLK AQGFSDAQLA RLSGQTIKDV VKLREKLEVF PAYRRIDTCA AEFASDTPYL
      541 YSSYEGGFGI PECESRPTNK DKIVILGGGP NRIGQGIEFD YCCVHAAYAL REAGFETIMV
      601 NCNPETVSTD YDTSDRLYFE PLTAEDVIAL IKTEAESGKV LGCIVQYGGQ TPLKLSRALE
      661 EAGIPLLGTP ADAIDRAEDR ERFQAMLRKL GLRQPKNGIA RNAAEAEKIA EEVGYPVVAR
      721 PSYVLGGRAM EIVYDTAGLK RYLNEVLHAA GPEVSTGPVL LDHYLNDAIE ADVDCISDGK
      781 NVYVAGVMEH IEEAGIHSGD SACSLPPYTL SPALVTELRS QTEAMARELG IRGLMNVQYA
      841 IKNDEVFVLE VNPRASRTVP FVAKATGIPV AKIGARIMAG ALLSDCQLDG EAVAPHVAVK
      901 EAVFPFHRFA NADTILGPEM RSTGEVMGLD ADFERAFAKS QLAAGVKLPL EGTVFLSVRD
      961 SDKKHVQQIA RKLVSMGFTI LATNGTAARL EEANIPVKRV NKVMQGRPNC VDAIRSGDVQ
     1021 MVINTSQGGQ AARDSYDIRR SALTMGIPHY TTIAGARAAT YAIAVLKEDN LGVAPLQSYF
     1081 KGTF
//