LOCUS QCY28102.1 545 aa PRT BCT 06-JUN-2019
DEFINITION Priestia megaterium NBRC 15308 = ATCC 14581 PTS transporter
subunit IICB protein.
ACCESSION CP035094-5272
PROTEIN_ID QCY28102.1
SOURCE Priestia megaterium NBRC 15308 = ATCC 14581
ORGANISM Priestia megaterium NBRC 15308 = ATCC 14581
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Priestia.
REFERENCE 1 (bases 1 to 5343009)
AUTHORS Chen,H.
TITLE Bacillus megaterium Genome sequencing and assembly
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5343009)
AUTHORS Chen,H.
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2019) Key Laboratory of Microbial Technology and
Bioinformatics of Zhejiang Province, Zhejiang Tianke High
Technology Development Co. Ltd., Huanggushan Road, Hangzhou,
Zhejiang 310000, China
COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (released 2013). Information about the Pipeline can be
found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##Genome-Assembly-Data-START##
Assembly Method :: Unicycler v. Unicycler v0.4.5
Assembly Name :: TK37
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 103.0x
Sequencing Technology :: Oxford Nanopore GridION
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 01/14/2019 10:26:59
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 4.7
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes (total) :: 5,913
CDSs (total) :: 5,741
Genes (coding) :: 5,596
CDSs (with protein) :: 5,596
Genes (RNA) :: 172
rRNAs :: 15, 13, 13 (5S, 16S, 23S)
complete rRNAs :: 15, 13, 13 (5S, 16S, 23S)
tRNAs :: 123
ncRNAs :: 8
Pseudo Genes (total) :: 145
CDSs (without protein) :: 145
Pseudo Genes (ambiguous residues) :: 0 of 145
Pseudo Genes (frameshifted) :: 53 of 145
Pseudo Genes (incomplete) :: 80 of 145
Pseudo Genes (internal stop) :: 41 of 145
Pseudo Genes (multiple problems) :: 27 of 145
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Priestia megaterium NBRC 15308 = ATCC 14581"
/mol_type="genomic DNA"
/strain="ATCC 14581"
/culture_collection="ATCC:14581"
/type_material="type strain of Bacillus megaterium"
/db_xref="taxon:1348623"
protein /locus_tag="EQG57_27195"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_016765957.1"
/note="phosphoenolpyruvate-dependent sugar
phosphotransferase system; catalyzes the phosphorylation
of incoming sugar substrates concomitant with their
translocation across the cell membrane; IIB is
phosphorylated by IIA and then transfers the phosphoryl
group to the sugar; IIC forms the translocation channel;
Derived by automated computational analysis using gene
prediction method: Protein Homology."
/transl_table=11
BEGIN
1 MKKFFSFDFW QKFGKALLVV VAVMPAAGIM ISLGKLVAMT GGDITAVQTI ARVMEDIGWG
61 IITNLHILFA VAIGGSWAKE RAGGAFAALI AFILINRITG AIFGVKAEML SDSKATVQSL
121 FGQELVVKDY FTSILGSPAL NMGVFVGIIA GFLGANLFNK YYNYDKLPEA LSFFNGKRFV
181 PFVVIGGSVV TALLLSIVWP FIQGSLNSFG QWIATSRDTA PILAPFIFGA LERLLLPFGL
241 HHMLTVPMNY TELGGTYKIL TGSGAGSTVA GQDPLWLAWI ADLNNFRAAG DMESYKQLLH
301 DVTPARFKVG QMILSCASLI GIALAMYRNV DPDKRSKYRS MFFSAGLAVF LTGVTEPIEF
361 MFMFAAPLLY VVYAIMTGLA FAIVDIVHVR VHSFGVIELL TRTPMIIKAG LWADLMNFII
421 ACLVFFGLNF GVANFLIKRF NFPTPGRNGN YIDEETTATS SKQVKNDSLA PVIIGLLGGE
481 NNIEDVDACM TRLRVTVKDI HAVAGESEWK QNGALGLILK DKGVQAIYGP KADVLKSDIQ
541 DLLGA
//