LOCUS       QAY61063.1               831 aa    PRT              BCT 03-FEB-2019
DEFINITION  Microbacterium protaetiae ATP-dependent DNA ligase protein.
ACCESSION   CP035494-2850
PROTEIN_ID  QAY61063.1
SOURCE      Microbacterium protaetiae
  ORGANISM  Microbacterium protaetiae
            Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae;
            Microbacterium.
REFERENCE   1  (bases 1 to 3790483)
  AUTHORS   Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
  TITLE     Genome sequencing of strain DFW100M-13
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3790483)
  AUTHORS   Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-JAN-2019) Agricultural Mircrobiology Division,
            National Institute of Agricultural Sciences, 166
            Nongsaengmyeong-ro, Iseo-myeon, Wanju-gun, Jeollabuk-do 55365,
            Korea, Republic of
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: JAN-2019
            Assembly Method        :: RS HGAP Assembly v. 3.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 273.0x
            Sequencing Technology  :: PacBio RSII
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/28/2019 13:01:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,540
            CDSs (total)                      :: 3,486
            Genes (coding)                    :: 3,406
            CDSs (with protein)               :: 3,406
            Genes (RNA)                       :: 54
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 80
            CDSs (without protein)            :: 80
            Pseudo Genes (ambiguous residues) :: 0 of 80
            Pseudo Genes (frameshifted)       :: 26 of 80
            Pseudo Genes (incomplete)         :: 57 of 80
            Pseudo Genes (internal stop)      :: 7 of 80
            Pseudo Genes (multiple problems)  :: 10 of 80
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Microbacterium protaetiae"
                     /mol_type="genomic DNA"
                     /strain="DFW100M-13"
                     /host="Protaetia brevitarsis seulensis larva"
                     /culture_collection="KACC:19323"
                     /type_material="type strain of Microbacterium protaetiae"
                     /db_xref="taxon:2509458"
                     /country="South Korea: Wanju-gun"
                     /collection_date="2016"
                     /collected_by="Soo-Jin Kim"
                     /identified_by="Soo-Jin Kim, Jun Heo, Soon-Wo Kwon"
     protein         /locus_tag="ET475_14420"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020489398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MGEERLVQIG GRRLRLSRLE KVLYPATGTT KGEVIDYYTR IAPLLLPHIT GRPVTRKRWP
       61 EGVDHPPFFA KNLESGAPEW VHRLPIEHST GAKDYPLVDD VPTLVYLAQV ASLELHVPQW
      121 RFTPEGERAR PDRLVLDLDP GPGVGLPECA RVALWVREIL SGMGLETFPV TSGSKGIHLY
      181 AGLDGSQTSE QASALAKELA RLLEADHPDL VVSRMAKNLR ADKVLLDWSQ NNGSKTTIAP
      241 YSLRGRELPT VAAPRTWDEL ADPALTQLSF DEVLERAERI GDPMASLGFR AGGRAAASGP
      301 LSAYIAKRDA ARTPEPVPDN PLAAATPVGQ PPRFVIQEHH ARRLHWDLRL EHDGVFVSWA
      361 VPRGVPPTAG RNSLAVMTED HPLEYGSFEG TIPHGEYGGG TVTIWDDGRY DPEKWRDDEV
      421 IFTAHGRPGG PLGTVRLALI RTQGSGERSS WLLHRTKTDA EGRVQPDGQP VMPTEQADEP
      481 SAGGASRHRQ TRDAAAATAP PATVPAPIGP AAVAPMLSTL ARPAAARTAA GRWGAWAEMK
      541 WDGIRAVGVW DGASLRLFAR RGTDITARYP ELTAVDAGLS DEPAVVDGEI IALDASGRPS
      601 FPLLQRRMHL TAARQIEGER RRTPVRYHLF DVLAVSGTDL AGRALRERRE VLESIAAHTI
      661 DEIVVPPVFD DVDEALATAA RLQLEGIVVK DPASPYRRGV RSDQWLKVKL TRTQEVVIGG
      721 IRPGRGGRTG SIGSLLLGIP DENGLHYAGR VGSGFSESTL SRLMSVLEPL RCDSDPFVGV
      781 PAADARDAEW VRPELVGEVE FAEFTPGGIL RQARWRGLRP DKTPAEVRRE S
//