LOCUS QAY61063.1 831 aa PRT BCT 03-FEB-2019 DEFINITION Microbacterium protaetiae ATP-dependent DNA ligase protein. ACCESSION CP035494-2850 PROTEIN_ID QAY61063.1 SOURCE Microbacterium protaetiae ORGANISM Microbacterium protaetiae Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium. REFERENCE 1 (bases 1 to 3790483) AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W. TITLE Genome sequencing of strain DFW100M-13 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3790483) AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W. TITLE Direct Submission JOURNAL Submitted (25-JAN-2019) Agricultural Mircrobiology Division, National Institute of Agricultural Sciences, 166 Nongsaengmyeong-ro, Iseo-myeon, Wanju-gun, Jeollabuk-do 55365, Korea, Republic of COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: JAN-2019 Assembly Method :: RS HGAP Assembly v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 273.0x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 01/28/2019 13:01:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 3,540 CDSs (total) :: 3,486 Genes (coding) :: 3,406 CDSs (with protein) :: 3,406 Genes (RNA) :: 54 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 3 Pseudo Genes (total) :: 80 CDSs (without protein) :: 80 Pseudo Genes (ambiguous residues) :: 0 of 80 Pseudo Genes (frameshifted) :: 26 of 80 Pseudo Genes (incomplete) :: 57 of 80 Pseudo Genes (internal stop) :: 7 of 80 Pseudo Genes (multiple problems) :: 10 of 80 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Microbacterium protaetiae" /mol_type="genomic DNA" /strain="DFW100M-13" /host="Protaetia brevitarsis seulensis larva" /culture_collection="KACC:19323" /type_material="type strain of Microbacterium protaetiae" /db_xref="taxon:2509458" /country="South Korea: Wanju-gun" /collection_date="2016" /collected_by="Soo-Jin Kim" /identified_by="Soo-Jin Kim, Jun Heo, Soon-Wo Kwon" protein /locus_tag="ET475_14420" /EC_number="6.5.1.1" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_020489398.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MGEERLVQIG GRRLRLSRLE KVLYPATGTT KGEVIDYYTR IAPLLLPHIT GRPVTRKRWP 61 EGVDHPPFFA KNLESGAPEW VHRLPIEHST GAKDYPLVDD VPTLVYLAQV ASLELHVPQW 121 RFTPEGERAR PDRLVLDLDP GPGVGLPECA RVALWVREIL SGMGLETFPV TSGSKGIHLY 181 AGLDGSQTSE QASALAKELA RLLEADHPDL VVSRMAKNLR ADKVLLDWSQ NNGSKTTIAP 241 YSLRGRELPT VAAPRTWDEL ADPALTQLSF DEVLERAERI GDPMASLGFR AGGRAAASGP 301 LSAYIAKRDA ARTPEPVPDN PLAAATPVGQ PPRFVIQEHH ARRLHWDLRL EHDGVFVSWA 361 VPRGVPPTAG RNSLAVMTED HPLEYGSFEG TIPHGEYGGG TVTIWDDGRY DPEKWRDDEV 421 IFTAHGRPGG PLGTVRLALI RTQGSGERSS WLLHRTKTDA EGRVQPDGQP VMPTEQADEP 481 SAGGASRHRQ TRDAAAATAP PATVPAPIGP AAVAPMLSTL ARPAAARTAA GRWGAWAEMK 541 WDGIRAVGVW DGASLRLFAR RGTDITARYP ELTAVDAGLS DEPAVVDGEI IALDASGRPS 601 FPLLQRRMHL TAARQIEGER RRTPVRYHLF DVLAVSGTDL AGRALRERRE VLESIAAHTI 661 DEIVVPPVFD DVDEALATAA RLQLEGIVVK DPASPYRRGV RSDQWLKVKL TRTQEVVIGG 721 IRPGRGGRTG SIGSLLLGIP DENGLHYAGR VGSGFSESTL SRLMSVLEPL RCDSDPFVGV 781 PAADARDAEW VRPELVGEVE FAEFTPGGIL RQARWRGLRP DKTPAEVRRE S //